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GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00401
Bact-VirGOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00401
Identity
- Kingdom:
- phage
Quality
53.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 413-574
D2
medium
residues 61-127
D3
medium
residues 183-266
Domain cluster:
rep: ON755184.1__UVF61518.1__SEA_DALANDE_105__00105__D152-256
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 28.0 | 3.31e-01 | 84.5% | 71.9% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 29.0 | 3.27e-01 | 77.4% | 66.7% |
| 2rjqA02 | 3.40.1620.60 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.53 | 33.0 | 3.46e-01 | 100.0% | 68.5% |
| 2jeuA02 | 2.170.200.10 | Mainly Beta › Beta Complex › Regulatory Protein E2; Chain: A; Domain 2 › Papillomavirus E2 early protein domain | 0.51 | 31.0 | 2.97e-01 | 76.2% | 50.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1945687 | 387.1.1.10 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › zf-GRF | 0.57 | 31.0 | 3.47e-01 | 85.7% | 65.7% |
| 3309726 | 375.1.1.191 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_GRF | 0.56 | 32.0 | 3.70e-01 | 85.7% | 81.8% |
| 4647050 | 1.1.13.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ | 0.53 | 39.0 | 4.03e-01 | 100.0% | 83.7% |
| 3765289 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 28.0 | 2.78e-01 | 100.0% | 46.7% |
D4
medium
residues 342-407