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GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00405

Bact-Vir

GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00405

Identity

Kingdom:
phage

Quality

82.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-82
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mtnA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 56.0 6.18e-01 91.4% 96.8%
1y14D02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 61.0 6.01e-01 97.5% 98.9%
2c35B02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 61.0 5.85e-01 97.5% 96.7%
2ja9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 61.0 6.05e-01 100.0% 98.8%
2id0A02 2.40.50.640 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 53.0 5.58e-01 100.0% 95.9%
2nttA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 51.0 5.35e-01 100.0% 97.1%
3tssA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 50.0 5.28e-01 96.3% 100.0%
1b3qA04 2.40.50.180 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 0.63 45.0 4.93e-01 93.8% 96.8%
3u4zA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 56.0 5.13e-01 100.0% 74.3%
4hikA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 57.0 4.75e-01 100.0% 78.3%
1eovA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 56.0 4.77e-01 100.0% 67.2%
3i7fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 56.0 4.82e-01 100.0% 68.0%
1ty0A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 51.0 5.23e-01 98.8% 96.0%
2r61A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 49.0 5.08e-01 96.3% 94.5%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 55.0 4.96e-01 100.0% 82.5%
5i4dA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 50.0 5.15e-01 97.5% 94.7%
5gqoA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 55.0 5.18e-01 100.0% 86.6%
4damC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 54.0 5.10e-01 100.0% 92.0%
4pofA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 54.0 5.03e-01 100.0% 84.6%
2k50A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 54.0 5.00e-01 100.0% 85.6%
4qy7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 53.0 5.25e-01 97.5% 98.9%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 53.0 5.08e-01 98.8% 85.4%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 54.0 4.81e-01 100.0% 71.6%
3kojB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 52.0 5.10e-01 96.3% 91.1%
1z9fA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 53.0 5.18e-01 98.8% 91.0%
1eu3A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 52.0 5.27e-01 100.0% 98.8%
1jb3A00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 52.0 4.53e-01 98.8% 76.4%
2zxrA01 2.40.50.460 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 46.0 3.78e-01 98.8% 43.7%
3f1zI00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 50.0 4.48e-01 95.1% 69.8%
2iciA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 49.0 5.02e-01 98.8% 98.7%
1p16B02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 51.0 4.42e-01 100.0% 64.7%
1ue6D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 52.0 4.81e-01 100.0% 88.5%
2qdlA02 2.40.50.180 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 0.59 44.0 4.44e-01 95.1% 79.5%
4rfbA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 47.0 4.89e-01 98.8% 97.3%
1je5A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 50.0 3.97e-01 100.0% 90.6%
2rdgA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 45.0 4.75e-01 98.8% 97.2%
1fnuA01 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 50.0 5.03e-01 98.8% 97.5%
6ro0B02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 48.0 4.48e-01 100.0% 84.5%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 48.0 4.63e-01 96.3% 95.6%
3qexA06 3.40.1820.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease H-like motif › DnaQ-like 3'-5' exonuclease 0.54 43.0 4.22e-01 97.5% 78.3%
6p66D01 3.40.91.30 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.52 36.0 3.33e-01 72.8% 85.3%
3c8iA00 2.40.410.10 Mainly Beta › Beta Barrel › putative membrane protein from Corynebacterium diphtheriae fold › putative membrane protein from Corynebacterium diphtheriae superfamily 0.52 45.0 3.94e-01 100.0% 81.1%
6dddH00 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.51 41.0 4.01e-01 91.4% 100.0%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4453243 2.1.1.219 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_cyt-4 0.75 61.0 6.04e-01 100.0% 83.5%
3720702 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 54.0 5.34e-01 98.8% 72.9%
4018598 2.1.1.219 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_cyt-4 0.72 57.0 5.78e-01 95.1% 85.0%
4154388 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 57.0 5.77e-01 93.8% 86.3%
3240790 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 53.0 5.83e-01 95.1% 100.0%
4385597 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.70 55.0 5.34e-01 95.1% 75.6%
3626692 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 54.0 5.58e-01 98.8% 89.3%
4240090 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.69 59.0 5.52e-01 100.0% 77.0%
4348646 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.68 58.0 5.33e-01 98.8% 72.4%
4309540 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.68 58.0 5.33e-01 98.8% 72.4%
4526081 2.1.1.73 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N 0.68 52.0 5.52e-01 96.3% 95.7%
4088295 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 52.0 5.25e-01 100.0% 83.7%
4600925 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 57.0 5.44e-01 97.5% 78.9%
3997676 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 55.0 5.37e-01 95.1% 80.0%
3553354 2.1.1.87 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB 0.68 57.0 5.64e-01 96.3% 87.1%
3497958 2.1.1.69 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI2 0.68 58.0 4.77e-01 97.5% 56.1%
4641051 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 46.0 5.10e-01 97.5% 95.0%
4101241 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.67 56.0 5.20e-01 96.3% 73.0%
4033869 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.67 59.0 5.39e-01 100.0% 74.3%
4360988 2.1.1.194 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Mit_ribos_Mrp51 0.67 57.0 4.99e-01 96.3% 62.5%
4439090 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.67 57.0 4.87e-01 98.8% 58.5%
4641259 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 57.0 5.32e-01 100.0% 77.0%
4609120 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.66 55.0 5.37e-01 96.3% 82.2%
4187609 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.66 56.0 5.29e-01 96.3% 78.9%
4321619 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.65 56.0 5.21e-01 100.0% 74.3%
3436242 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 56.0 4.55e-01 100.0% 49.7%
3384331 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 53.0 5.31e-01 92.6% 84.7%
4039730 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.65 56.0 5.11e-01 98.8% 72.4%
4951486 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.65 57.0 5.19e-01 98.8% 72.7%
4065889 2007.1.12.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase 0.65 55.0 3.78e-01 98.8% 26.7%
3259503 2.1.1.142 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB 0.64 55.0 4.88e-01 98.8% 65.0%
5079140 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 50.0 4.69e-01 100.0% 67.0%
4064637 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 57.0 4.73e-01 100.0% 60.0%
4025310 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.64 57.0 4.88e-01 100.0% 62.3%
4301123 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 54.0 5.50e-01 100.0% 96.2%
4952161 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 51.0 5.03e-01 97.5% 83.5%
3476052 2.1.1.142 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB 0.63 55.0 4.54e-01 100.0% 52.7%
4594372 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 54.0 5.23e-01 100.0% 83.3%
4369732 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 55.0 5.04e-01 98.8% 72.7%
4450697 2007.1.12.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase 0.63 57.0 3.84e-01 100.0% 59.3%
1030850 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.63 45.0 4.92e-01 95.1% 95.4%
3688038 2.1.1.194 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Mit_ribos_Mrp51 0.63 56.0 4.78e-01 100.0% 63.1%
4028808 2.1.1.142 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB 0.63 55.0 4.46e-01 100.0% 51.2%
4145388 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.63 47.0 3.98e-01 96.3% 47.1%
3590786 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 55.0 4.99e-01 98.8% 72.7%
1674567 2.2.1.6 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › SSL_OB 0.62 50.0 4.83e-01 98.8% 77.7%
3963927 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 55.0 4.96e-01 98.8% 73.6%
4238279 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.62 55.0 4.94e-01 100.0% 89.6%
4964458 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 54.0 4.99e-01 97.5% 81.9%
3211783 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 49.0 4.83e-01 98.8% 82.4%
3743261 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 55.0 4.81e-01 100.0% 74.2%
1275822 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.61 45.0 4.81e-01 95.1% 92.9%
5026916 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.61 54.0 4.94e-01 100.0% 81.8%
3655939 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 54.0 4.85e-01 100.0% 80.9%
1680468 2.2.1.6 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › SSL_OB 0.61 49.0 4.76e-01 98.8% 78.7%
3267878 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 50.0 4.86e-01 100.0% 84.4%
4032542 2.2.1.6 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › SSL_OB 0.60 48.0 4.74e-01 97.5% 84.7%
4682409 2007.1.12.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase 0.60 53.0 3.51e-01 100.0% 53.5%
4950861 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.60 46.0 3.81e-01 96.3% 44.5%
4993852 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 53.0 4.80e-01 100.0% 83.6%
4478491 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.59 53.0 4.87e-01 100.0% 96.2%
163857 2.2.1.1 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Stap_Strp_toxin 0.59 49.0 4.69e-01 97.5% 79.8%
3707855 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 52.0 4.59e-01 100.0% 70.8%
145830 2.2.1.6 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › SSL_OB 0.59 47.0 4.65e-01 98.8% 82.0%
3173045 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 50.0 4.17e-01 100.0% 62.6%
5057050 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 51.0 4.42e-01 97.5% 100.0%
3387448 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.58 46.0 3.87e-01 96.3% 50.0%
5016329 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.58 42.0 4.46e-01 97.5% 92.9%
164228 2.1.1.54 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3217 0.56 48.0 4.53e-01 100.0% 88.5%
3989249 2.1.1.85 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecJ_OB 0.56 47.0 4.25e-01 97.5% 67.8%
3967460 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.55 44.0 3.71e-01 96.3% 49.0%
3962565 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 45.0 4.24e-01 92.6% 76.0%
3612144 237.1.1.0 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.52 47.0 3.07e-01 100.0% 29.3%
3707381 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 46.0 4.05e-01 100.0% 79.2%
5023132 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.52 46.0 4.19e-01 98.8% 84.5%
4138994 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.52 39.0 4.12e-01 91.4% 97.1%
3561821 237.1.1.2 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART 0.50 44.0 3.20e-01 100.0% 33.5%
D2 high residues 84-134
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8gtzA03 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.66 53.0 3.71e-01 92.2% 29.8%
2yx1A02 3.30.300.110 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Met-10+ protein-like domains 0.66 53.0 4.65e-01 90.2% 67.5%
4k3wA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.64 50.0 3.41e-01 88.2% 25.1%
5yloA00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.64 49.0 3.23e-01 86.3% 21.7%
3njdA00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.64 51.0 3.21e-01 90.2% 19.7%
5wydA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.63 50.0 3.40e-01 88.2% 25.5%
4jcsA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.63 50.0 3.38e-01 88.2% 25.6%
3rrvC00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.62 49.0 3.18e-01 88.2% 21.3%
1ef8A02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.62 50.0 3.47e-01 88.2% 28.5%
4k29B00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.62 49.0 3.15e-01 88.2% 19.4%
2iexA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.62 48.0 3.36e-01 88.2% 27.4%
4alzA03 3.30.70.1770 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 51.0 4.71e-01 90.2% 75.0%
3hp0A00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.62 49.0 3.17e-01 88.2% 20.8%
3omeB00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.61 48.0 3.15e-01 88.2% 21.5%
3hinA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.61 49.0 3.34e-01 92.2% 25.6%
3tlfD01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.60 47.0 3.22e-01 88.2% 25.0%
3rsiB01 3.30.300.220 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.60 47.0 4.40e-01 86.3% 79.7%
4lk5A00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.60 46.0 3.07e-01 88.2% 22.1%
3g64A01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.60 47.0 3.19e-01 88.2% 24.2%
4jwvA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.59 46.0 3.14e-01 86.3% 26.5%
5c9gF01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.59 46.0 3.12e-01 86.3% 24.9%
2fbmA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.59 46.0 3.13e-01 88.2% 25.7%
2ppyA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.58 47.0 3.19e-01 88.2% 25.0%
4i9fA03 3.30.300.290 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.58 45.0 4.06e-01 90.2% 67.5%
3iylW04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 48.0 3.20e-01 100.0% 39.5%
3ot6A00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.57 43.0 2.93e-01 88.2% 22.6%
1yx0A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 43.0 3.19e-01 88.2% 40.4%
1gwbA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.56 37.0 2.41e-01 86.3% 13.2%
7a2dA01 6.10.20.90 Special › Helix non-globular › Arc Repressor Mutant, subunit A › Hk620 tailspike protein, N-terminal domain-like 0.55 43.0 3.94e-01 90.2% 63.4%
4nnqC01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.53 39.0 2.86e-01 84.3% 31.5%
2hy1A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.52 42.0 2.87e-01 98.0% 27.8%
2pbpA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.51 39.0 2.81e-01 92.2% 27.4%
8b28A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 39.0 2.55e-01 98.0% 74.4%
3i6dA02 3.90.660.20 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › Protoporphyrinogen oxidase, mitochondrial; domain 2 0.51 36.0 2.61e-01 82.4% 35.9%
1o8uC00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.50 38.0 2.55e-01 88.2% 45.3%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4129776 327.10.1.3 a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N 0.73 60.0 5.37e-01 94.1% 73.3%
4413472 327.10.1.3 a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N 0.73 59.0 5.26e-01 92.2% 69.3%
4937048 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.71 56.0 5.55e-01 90.2% 94.5%
3289823 213.5.1.1 a+b three layers › Nat/Ivy › AlkZ C-terminal domain › AlkZ C-terminal domain › AlkZ-like 0.70 56.0 4.61e-01 90.2% 98.9%
5000322 246.2.1.9 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.70 55.0 3.59e-01 84.3% 27.7%
5024236 246.2.1.9 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.69 54.0 3.65e-01 84.3% 28.9%
3283125 213.5.1.1 a+b three layers › Nat/Ivy › AlkZ C-terminal domain › AlkZ C-terminal domain › AlkZ-like 0.69 55.0 4.68e-01 92.2% 60.0%
4976034 327.7.1.2 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C 0.69 56.0 5.19e-01 92.2% 87.7%
4957434 213.5.1.1 a+b three layers › Nat/Ivy › AlkZ C-terminal domain › AlkZ C-terminal domain › AlkZ-like 0.68 55.0 4.53e-01 90.2% 60.0%
5003130 213.5.1.1 a+b three layers › Nat/Ivy › AlkZ C-terminal domain › AlkZ C-terminal domain › AlkZ-like 0.65 51.0 4.25e-01 90.2% 100.0%
4981942 327.7.1.2 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C 0.64 51.0 4.90e-01 92.2% 88.3%
5010069 2486.1.1.1 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.63 51.0 3.32e-01 88.2% 21.3%
5057096 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.63 50.0 4.69e-01 92.2% 70.8%
2142603 2486.1.1.1 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.63 50.0 3.23e-01 88.2% 19.8%
3279868 2486.1.1.1 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.63 50.0 3.12e-01 88.2% 16.7%
3959185 2486.1.1.1 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.62 48.0 3.48e-01 86.3% 31.4%
3966289 2486.1.1.0 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.62 48.0 3.12e-01 88.2% 20.1%
3914290 207.1.1.130 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 0.61 46.0 2.59e-01 90.2% 6.8%
5026379 2486.1.1.1 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.61 49.0 3.14e-01 88.2% 18.8%
4102068 2486.1.1.1 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.61 48.0 3.14e-01 88.2% 20.1%
5026050 2486.1.1.1 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.61 48.0 3.10e-01 86.3% 20.4%
5033034 2486.1.1.1 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.61 48.0 3.13e-01 88.2% 20.4%
3905470 207.1.1.141 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 0.60 45.0 2.53e-01 90.2% 6.3%
3958266 2486.1.1.0 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.60 47.0 3.10e-01 86.3% 21.3%
3952048 213.1.1.40 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_like 0.60 47.0 4.03e-01 90.2% 67.0%
4003625 327.11.1.4 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › MRP-S24 0.60 47.0 4.01e-01 90.2% 72.2%
4955280 327.7.1.1 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.60 47.0 4.35e-01 90.2% 67.1%
3962213 2486.1.1.0 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.59 46.0 3.16e-01 86.3% 26.2%
4000094 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.59 45.0 3.39e-01 88.2% 37.9%
5081764 300.1.1.7 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PP_kinase_C 0.59 42.0 3.04e-01 86.3% 25.0%
4134619 2486.1.1.7 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 0.59 46.0 3.30e-01 86.3% 28.4%
3966932 2486.1.1.1 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 0.59 46.0 3.02e-01 86.3% 21.0%
4307447 2486.1.1.7 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 0.59 46.0 3.10e-01 86.3% 22.0%
5038951 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.58 46.0 3.40e-01 90.2% 64.1%
2494150 4064.1.1.6 a+b complex topology › Inner layer core protein p3-related › Inner layer core protein p3-related › Inner layer core protein p3-related › VP1-like_C 0.58 46.0 2.52e-01 92.2% 67.3%
3400099 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.58 44.0 2.91e-01 86.3% 29.2%
3969124 3261.1.1.2 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › Yop-YscD_ppl_1st 0.57 43.0 4.29e-01 90.2% 80.0%
5054192 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.55 46.0 3.77e-01 96.1% 63.0%
3286579 2003.1.10.9 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Lant_dehydr_N 0.54 42.0 3.60e-01 94.1% 74.7%
1884780 4321.1.1.2 a+b two layers › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › Peptidoglycan deacetylase N-terminal noncatalytic region › DUF3298,PdaC 0.53 41.0 2.83e-01 90.2% 27.3%
3656580 109.4.1.189 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.53 43.0 3.04e-01 94.1% 35.4%
3252046 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.53 39.0 2.66e-01 88.2% 49.8%
5045121 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.51 41.0 2.82e-01 100.0% 23.6%
3959630 2486.1.1.0 a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.50 37.0 2.82e-01 88.2% 34.8%