←Back to structures
GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00414
Bact-VirGOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00414
Identity
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 43-216
Domain cluster:
rep: zinc-dependent_metalloprotease__YP_009001713__Anomala_cuprea_entomopoxvirus__62099__D16-162
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00413.31 best | Peptidase_M10 | 40.7 | 3.20e-10 | 88.5% | 88.0% |
| PF12388.15 | Peptidase_M57 | 23.1 | 7.40e-05 | 72.4% | 15.1% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r3vA00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.76 | 72.0 | 7.13e-01 | 100.0% | 96.6% |
| 1ck7A01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.73 | 69.0 | 6.12e-01 | 100.0% | 73.2% |
| 8bdpA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.71 | 47.0 | 5.42e-01 | 93.7% | 92.0% |
| 3suuA02 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.62 | 46.0 | 5.01e-01 | 100.0% | 91.7% |
| 6lkzC01 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.62 | 49.0 | 3.86e-01 | 83.3% | 100.0% |
| 2hxsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 41.0 | 4.11e-01 | 70.1% | 98.9% |
| 7mjzA01 | 3.40.50.12160 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylthiotransferase, N-terminal domain | 0.56 | 38.0 | 4.52e-01 | 70.1% | 100.0% |
| 3a32A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.54 | 39.0 | 4.32e-01 | 87.4% | 92.2% |
| 5xilA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.54 | 35.0 | 3.98e-01 | 88.5% | 89.1% |
| 3gbvA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 38.0 | 4.26e-01 | 73.6% | 100.0% |
| 3bblA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 39.0 | 4.33e-01 | 75.9% | 100.0% |
| 2qcuB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 40.0 | 3.66e-01 | 79.3% | 97.4% |
| 2petA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 23.0 | 2.75e-01 | 87.4% | 59.1% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3365321 | 2498.1.1.1 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M10 | 0.79 | 75.0 | 7.33e-01 | 100.0% | 98.4% |
| 3233908 | 2498.1.1.1 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M10 | 0.79 | 67.0 | 6.84e-01 | 88.5% | 100.0% |
| 3987761 | 2498.1.1.1 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M10 | 0.78 | 67.0 | 7.09e-01 | 93.7% | 99.4% |
| 3698291 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.75 | 67.0 | 6.37e-01 | 94.3% | 93.0% |
| 3935126 | 2498.1.1.1 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M10 | 0.74 | 69.0 | 6.72e-01 | 99.4% | 99.5% |
| 3696059 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.73 | 66.0 | 6.26e-01 | 94.3% | 96.0% |
| 3793590 | 2498.1.1.1 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M10 | 0.72 | 68.0 | 6.76e-01 | 100.0% | 100.0% |
| 3870247 | 2498.1.1.1 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M10 | 0.70 | 66.0 | 6.43e-01 | 100.0% | 96.3% |
| 3991457 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.68 | 29.0 | 4.04e-01 | 81.0% | 78.9% |
| 4237583 | 2498.1.1.22 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY | 0.65 | 47.0 | 5.25e-01 | 82.2% | 94.8% |
| 3960955 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.60 | 46.0 | 3.73e-01 | 78.2% | 69.8% |
| 135315 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.59 | 44.0 | 3.82e-01 | 77.0% | 79.9% |
| 3509435 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.58 | 42.0 | 4.74e-01 | 77.6% | 97.7% |
| 3397067 | 2498.2.1.4 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glycohydro_20b2 | 0.58 | 43.0 | 4.32e-01 | 100.0% | 73.9% |
| 3676215 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.57 | 33.0 | 3.75e-01 | 81.6% | 74.6% |
| 3276582 | 2006.1.6.39 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Mat89Bb | 0.57 | 44.0 | 3.85e-01 | 81.6% | 92.0% |
| 4006576 | 3598.1.1.4 ↗ | a/b three-layered sandwiches › Cellulose Synthase Subunit B a/b domain › Cellulose Synthase Subunit B a/b domain › Cellulose Synthase Subunit B a/b domain › PF29164 | 0.56 | 44.0 | 4.76e-01 | 87.9% | 99.3% |
| 3980436 | 10.32.1.314 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29164 | 0.56 | 43.0 | 4.72e-01 | 85.6% | 100.0% |
| 2581841 | 7503.1.1.7 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LpoB | 0.56 | 42.0 | 4.60e-01 | 93.1% | 96.4% |
| 5041879 | 2007.1.1.14 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › ABC_transp_aux | 0.56 | 39.0 | 3.53e-01 | 71.3% | 99.2% |
| 4247282 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.56 | 42.0 | 4.61e-01 | 78.7% | 95.7% |
| 3390011 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.56 | 44.0 | 4.16e-01 | 82.2% | 80.3% |
| 4928127 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.55 | 43.0 | 4.26e-01 | 82.2% | 97.3% |
| 3414306 | 2498.2.1.4 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glycohydro_20b2 | 0.55 | 42.0 | 4.24e-01 | 100.0% | 77.2% |
| 2581837 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.54 | 43.0 | 4.55e-01 | 94.3% | 93.0% |
| 3506145 | 2498.2.1.8 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › PF29164 | 0.54 | 43.0 | 4.58e-01 | 84.5% | 98.7% |
| 3343075 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.53 | 32.0 | 3.57e-01 | 83.3% | 75.6% |
| 3808446 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.53 | 31.0 | 3.75e-01 | 82.2% | 87.0% |
| 3594674 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.52 | 36.0 | 4.01e-01 | 98.3% | 91.1% |
| 3195018 | 7575.1.1.0 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like | 0.52 | 43.0 | 3.76e-01 | 87.4% | 88.6% |
| 2576238 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.51 | 34.0 | 3.86e-01 | 84.5% | 90.6% |
| 4017805 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.51 | 41.0 | 3.73e-01 | 87.4% | 97.1% |
| 4031252 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.50 | 24.0 | 3.24e-01 | 73.0% | 84.2% |