←Back to structures
GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00425
Bact-VirGOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00425
Identity
- Kingdom:
- phage
Quality
76.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-42_789-1055
Domain cluster:
rep: IMGVR_UViG_648028040_000001-648028040-648194435__D26-229
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3foaB01 | 3.40.50.11780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.78 | 60.0 | 6.71e-01 | 88.7% | 97.7% |
| 3luaA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 34.0 | 4.87e-01 | 72.0% | 96.8% |
| 3clkA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 33.0 | 4.51e-01 | 97.5% | 86.4% |
| 2ynmD01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.65 | 30.0 | 4.07e-01 | 98.2% | 81.0% |
| 3i09A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 45.0 | 5.14e-01 | 85.8% | 95.6% |
| 1jdpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 38.0 | 4.59e-01 | 90.5% | 88.8% |
| 4dcuA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 32.0 | 4.38e-01 | 100.0% | 97.9% |
| 1dp4A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 46.0 | 5.14e-01 | 92.4% | 97.7% |
| 3odpA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.61 | 33.0 | 3.96e-01 | 76.4% | 76.9% |
| 3qxcA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 41.0 | 4.53e-01 | 98.5% | 83.9% |
| 2we8A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 35.0 | 4.50e-01 | 98.9% | 100.0% |
| 3i6iA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 40.0 | 4.72e-01 | 89.5% | 98.9% |
| 5gujA02 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.59 | 29.0 | 4.15e-01 | 93.1% | 100.0% |
| 5xc5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 35.0 | 4.45e-01 | 72.7% | 98.8% |
| 6ejiA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 37.0 | 4.48e-01 | 97.8% | 100.0% |
| 4gieA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.55 | 34.0 | 3.41e-01 | 91.3% | 57.3% |
| 3fleA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 39.0 | 4.17e-01 | 71.6% | 98.4% |
| 3q71A00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.54 | 33.0 | 3.75e-01 | 92.7% | 78.8% |
| 1ct5A00 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.53 | 35.0 | 3.87e-01 | 84.4% | 80.3% |
| 3wisA00 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.52 | 33.0 | 4.04e-01 | 72.7% | 96.1% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 17.0 | 2.66e-01 | 76.4% | 70.5% |
| 2zwiA01 | 3.40.50.11120 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sialyltransferase, N-terminal GT-B Rossman nucleotide-binding domain | 0.51 | 37.0 | 4.06e-01 | 88.4% | 90.8% |
| 1lhpA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 44.0 | 4.27e-01 | 90.5% | 98.7% |
| 3s8mA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 42.0 | 3.71e-01 | 84.7% | 84.1% |
| 4urjD00 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.51 | 33.0 | 4.01e-01 | 91.3% | 100.0% |
| 4wjmA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 42.0 | 4.05e-01 | 87.6% | 93.9% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2391375 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.86 | 63.0 | 6.91e-01 | 94.2% | 89.5% |
| 5060661 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.84 | 69.0 | 7.26e-01 | 95.3% | 91.6% |
| 4889792 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.84 | 65.0 | 7.28e-01 | 93.5% | 98.6% |
| 4995822 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.83 | 71.0 | 7.41e-01 | 93.5% | 94.9% |
| 2832219 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.80 | 71.0 | 6.40e-01 | 92.7% | 94.5% |
| 3948874 | 2499.2.1.6 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › DUF3383 | 0.78 | 61.0 | 6.49e-01 | 91.6% | 91.3% |
| 3513465 | 2499.2.1.6 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › DUF3383 | 0.75 | 64.0 | 6.71e-01 | 94.5% | 95.3% |
| 4888782 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.75 | 69.0 | 6.92e-01 | 95.3% | 97.5% |
| 138650 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.72 | 34.0 | 4.95e-01 | 72.0% | 97.6% |
| 4953940 | 2007.7.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Precorrin-8X methylmutase CbiC/CobH › Precorrin-8X methylmutase CbiC/CobH › CbiC | 0.70 | 35.0 | 4.06e-01 | 72.0% | 64.2% |
| 4492727 | 2007.7.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Precorrin-8X methylmutase CbiC/CobH › Precorrin-8X methylmutase CbiC/CobH › CbiC | 0.69 | 35.0 | 4.05e-01 | 73.5% | 63.3% |
| 3944554 | 2007.7.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Precorrin-8X methylmutase CbiC/CobH › Precorrin-8X methylmutase CbiC/CobH › CbiC | 0.69 | 36.0 | 4.07e-01 | 73.5% | 64.8% |
| 5020870 | 2007.7.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Precorrin-8X methylmutase CbiC/CobH › Precorrin-8X methylmutase CbiC/CobH › CbiC | 0.68 | 36.0 | 3.95e-01 | 73.5% | 60.4% |
| 4974821 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.64 | 40.0 | 4.64e-01 | 88.4% | 85.6% |
| 4969318 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.62 | 39.0 | 4.79e-01 | 97.1% | 98.8% |
| 3180690 | 2007.1.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Peptidase_S66 | 0.61 | 36.0 | 4.50e-01 | 96.7% | 92.4% |
| 4585549 | 2003.1.1.39 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP | 0.61 | 42.0 | 4.90e-01 | 86.9% | 96.5% |
| 3217862 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.59 | 42.0 | 4.64e-01 | 100.0% | 89.1% |
| 4015610 | 2499.1.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like | 0.59 | 51.0 | 4.97e-01 | 89.8% | 88.8% |
| 5074471 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.58 | 47.0 | 4.67e-01 | 82.9% | 95.5% |
| 4029475 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.58 | 54.0 | 5.13e-01 | 99.3% | 86.3% |
| 3636403 | 4001.1.1.4 ↗ | a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB | 0.54 | 18.0 | 2.53e-01 | 74.2% | 56.2% |
| 5077570 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 36.0 | 3.59e-01 | 90.5% | 65.0% |
| 5040213 | 300.1.1.26 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › DUF7436 | 0.52 | 31.0 | 3.97e-01 | 88.0% | 98.8% |
| 1718623 | 7512.1.1.29 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › PM0188 | 0.51 | 37.0 | 4.05e-01 | 88.4% | 90.4% |
| None | — | 0.51 | 42.0 | 3.65e-01 | 88.0% | 97.9% | |
| 4184229 | 7548.1.1.1 ↗ | a/b three-layered sandwiches › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › CheB_methylest | 0.50 | 31.0 | 3.55e-01 | 98.5% | 79.0% |
D2
high
residues 45-150
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ea2A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.62 | 54.0 | 4.46e-01 | 94.3% | 80.2% |
| 4i0wD02 | 2.60.120.1290 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 46.0 | 4.37e-01 | 80.2% | 82.3% |
| 1dceA02 | 2.60.40.1130 | Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain | 0.61 | 47.0 | 4.78e-01 | 82.1% | 83.5% |
| 6mw4A01 | 2.60.120.1290 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 47.0 | 4.43e-01 | 83.0% | 82.3% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.61 | 44.0 | 4.27e-01 | 75.5% | 95.7% |
| 4psrA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 45.0 | 4.31e-01 | 79.2% | 70.5% |
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.59 | 44.0 | 4.34e-01 | 82.1% | 74.5% |
| 2xq0A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.59 | 50.0 | 4.27e-01 | 94.3% | 93.3% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.59 | 41.0 | 4.10e-01 | 72.6% | 73.9% |
| 6cl5A01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 44.0 | 4.55e-01 | 81.1% | 99.0% |
| 4rsvA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 42.0 | 4.52e-01 | 83.0% | 90.0% |
| 1n08A00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.58 | 43.0 | 3.83e-01 | 78.3% | 66.2% |
| 1vq8B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 40.0 | 3.74e-01 | 72.6% | 83.2% |
| 3thdC02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 40.0 | 3.40e-01 | 83.0% | 43.6% |
| 2lp6A00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.55 | 40.0 | 4.23e-01 | 76.4% | 96.7% |
| 5aca300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 43.0 | 3.49e-01 | 87.7% | 82.9% |
| 4p02B01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 40.0 | 3.78e-01 | 79.2% | 98.5% |
| 6ncyA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 41.0 | 3.42e-01 | 83.0% | 72.9% |
| 6mvfA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 41.0 | 3.75e-01 | 84.9% | 80.4% |
| 1f35A00 | 2.60.120.390 | Mainly Beta › Sandwich › Jelly Rolls › Olfactory marker | 0.53 | 42.0 | 3.71e-01 | 86.8% | 73.5% |
| 3hurA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.53 | 44.0 | 3.91e-01 | 93.4% | 84.5% |
| 2cdoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 40.0 | 3.76e-01 | 83.0% | 82.6% |
| 2c3vA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.87e-01 | 72.6% | 92.6% |
| 5euvA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 40.0 | 3.67e-01 | 84.0% | 64.9% |
| 4jklA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 41.0 | 3.49e-01 | 85.8% | 64.8% |
| 3j7yU00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 36.0 | 3.57e-01 | 70.8% | 96.4% |
| 1wzlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.94e-01 | 84.9% | 86.0% |
| 4indA02 | 2.60.120.1310 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 37.0 | 3.68e-01 | 75.5% | 97.3% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 4.09e-01 | 83.0% | 95.6% |
| 2vzsA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 40.0 | 3.43e-01 | 85.8% | 55.4% |
| 3abzA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 39.0 | 3.47e-01 | 83.0% | 80.0% |
| 4um8B02 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.50 | 38.0 | 3.52e-01 | 81.1% | 70.5% |
| 6ef7A00 | 2.60.40.4140 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 39.0 | 3.77e-01 | 85.8% | 81.5% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5050654 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.70 | 55.0 | 4.69e-01 | 83.0% | 87.9% |
| 3942563 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.67 | 47.0 | 4.83e-01 | 72.6% | 98.0% |
| 3927343 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.64 | 49.0 | 3.52e-01 | 81.1% | 27.6% |
| 3616680 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.64 | 54.0 | 4.30e-01 | 93.4% | 79.1% |
| 3797512 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.64 | 54.0 | 4.32e-01 | 93.4% | 81.4% |
| 3488907 | 10.32.1.3 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III | 0.63 | 49.0 | 4.31e-01 | 83.0% | 93.8% |
| 3583745 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 48.0 | 4.32e-01 | 80.2% | 63.4% |
| 3945010 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.62 | 48.0 | 4.25e-01 | 84.9% | 80.0% |
| 4295345 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.61 | 45.0 | 3.97e-01 | 77.4% | 58.1% |
| 3575666 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.60 | 40.0 | 4.48e-01 | 70.8% | 90.0% |
| 4003309 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.60 | 43.0 | 4.51e-01 | 74.5% | 83.2% |
| 3267385 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.60 | 41.0 | 3.73e-01 | 70.8% | 57.2% |
| 141846 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.59 | 51.0 | 4.09e-01 | 94.3% | 81.8% |
| 3970369 | 11.1.5.144 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › T6SS_TssF | 0.59 | 46.0 | 4.22e-01 | 84.0% | 86.4% |
| 4614136 | 12.1.1.44 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_5_C | 0.59 | 43.0 | 4.46e-01 | 87.7% | 82.0% |
| 4026390 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 42.0 | 3.92e-01 | 75.5% | 64.4% |
| 2448383 | 4182.1.1.3 ↗ | beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Gp53-like_C | 0.58 | 45.0 | 4.36e-01 | 83.0% | 86.1% |
| 3274204 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.57 | 40.0 | 3.58e-01 | 72.6% | 56.7% |
| 2505848 | 1.2.1.2 ↗ | beta barrels › cradle loop barrel › Capsid protein protrusion (P) domain › Capsid protein protrusion (P) domain › Calici_coat_C | 0.57 | 42.0 | 3.78e-01 | 78.3% | 85.1% |
| 3491700 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 45.0 | 3.96e-01 | 86.8% | 88.7% |
| 3797536 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 4.57e-01 | 85.8% | 89.5% |
| 3621477 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.56 | 44.0 | 4.47e-01 | 84.0% | 87.6% |
| 2323919 | 10.32.1.66 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF6805 | 0.56 | 42.0 | 3.89e-01 | 79.2% | 73.9% |
| 3221888 | 10.32.1.218 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 | 0.56 | 44.0 | 4.22e-01 | 84.9% | 97.6% |
| 3895887 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.56 | 43.0 | 4.04e-01 | 84.0% | 66.7% |
| 3201372 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 40.0 | 4.01e-01 | 74.5% | 97.1% |
| 3333811 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 44.0 | 3.53e-01 | 86.8% | 75.5% |
| 3911452 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.55 | 42.0 | 4.08e-01 | 84.9% | 71.7% |
| 4024940 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 41.0 | 3.54e-01 | 79.2% | 95.9% |
| 3507103 | 11.1.5.94 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 | 0.55 | 43.0 | 3.07e-01 | 84.9% | 44.4% |
| 3921289 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 40.0 | 3.93e-01 | 83.0% | 69.2% |
| 3579467 | 304.151.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF25899 | 0.55 | 38.0 | 3.59e-01 | 70.8% | 88.0% |
| 3946120 | 10.32.1.10 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BcsB | 0.55 | 41.0 | 3.85e-01 | 78.3% | 98.5% |
| 3595114 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 39.0 | 4.00e-01 | 76.4% | 98.1% |
| 3258831 | 10.32.1.76 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd | 0.55 | 42.0 | 4.11e-01 | 84.0% | 76.7% |
| 3918910 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.55 | 40.0 | 3.65e-01 | 83.0% | 56.6% |
| 3010256 | 10.27.1.1 ↗ | beta sandwiches › jelly-roll › Polyhedrin › Polyhedrin › Cypo_polyhedrin | 0.55 | 43.0 | 3.38e-01 | 87.7% | 69.4% |
| 3482950 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 39.0 | 3.65e-01 | 74.5% | 89.6% |
| 3877536 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.55 | 40.0 | 3.83e-01 | 84.0% | 64.6% |
| 4656397 | 11.1.5.129 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PF27684 | 0.54 | 40.0 | 3.56e-01 | 77.4% | 91.6% |
| 4308825 | 11.1.1.65 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CopC | 0.54 | 41.0 | 4.29e-01 | 82.1% | 93.7% |
| 4095144 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.53 | 41.0 | 3.65e-01 | 84.0% | 60.6% |
| 3275765 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 39.0 | 3.89e-01 | 81.1% | 75.5% |
| 5007278 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 41.0 | 3.88e-01 | 84.0% | 95.4% |
| 5041321 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 41.0 | 3.94e-01 | 84.0% | 89.2% |
| 3840640 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.52 | 40.0 | 3.70e-01 | 83.0% | 63.7% |
| 2446842 | 10.32.1.9 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glyco_hydro_2_N | 0.52 | 40.0 | 3.60e-01 | 83.0% | 60.9% |
| 4886474 | 2007.12.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Beta-D-glucan exohydrolase, C-terminal domain › Beta-D-glucan exohydrolase, C-terminal domain › PA14 | 0.52 | 40.0 | 3.56e-01 | 83.0% | 83.9% |
| 3915523 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.52 | 40.0 | 3.77e-01 | 84.9% | 67.4% |
| 4330140 | 11.1.1.577 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PFF1_C | 0.51 | 40.0 | 3.43e-01 | 83.0% | 53.7% |
| 3582277 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.51 | 40.0 | 3.81e-01 | 84.9% | 88.5% |
| 3600682 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.50 | 36.0 | 3.52e-01 | 73.6% | 93.9% |
D3
high
residues 172-186_596-683
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k7uC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 38.0 | 3.95e-01 | 79.6% | 61.2% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 39.0 | 3.97e-01 | 79.6% | 61.8% |
| 1jkfA03 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.63 | 31.0 | 3.96e-01 | 75.7% | 80.0% |
| 2qqpA03 | 2.60.40.4260 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 45.0 | 4.15e-01 | 78.6% | 95.6% |
| 2qomB00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.60 | 42.0 | 3.10e-01 | 71.8% | 53.5% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.59 | 31.0 | 4.03e-01 | 70.9% | 92.9% |
| 4rljA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 40.0 | 3.61e-01 | 78.6% | 85.4% |
| 3dbxA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.54 | 40.0 | 3.39e-01 | 79.6% | 94.4% |
| 3hpcX00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 43.0 | 3.80e-01 | 88.3% | 88.4% |
| 1a6zA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.53 | 39.0 | 3.31e-01 | 78.6% | 96.1% |
| 4iiqC02 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.53 | 39.0 | 3.32e-01 | 78.6% | 96.1% |
| 3wasA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 44.0 | 3.00e-01 | 92.2% | 87.4% |
| 5xd7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 37.0 | 3.47e-01 | 77.7% | 59.1% |
| 1mbyA00 | 2.40.50.930 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 36.0 | 4.12e-01 | 76.7% | 97.3% |
| 3sy9C01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.52 | 37.0 | 2.62e-01 | 74.8% | 94.1% |
| 6lofA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.51 | 43.0 | 3.76e-01 | 94.2% | 86.4% |
| 3fzxA00 | 2.40.360.20 | Mainly Beta › Beta Barrel › YmcC-like fold › | 0.51 | 42.0 | 3.34e-01 | 88.3% | 91.5% |
| 2o62A02 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 37.0 | 3.37e-01 | 74.8% | 62.0% |
| 2q2bA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 39.0 | 3.50e-01 | 80.6% | 87.9% |
| 4nyqA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 40.0 | 3.55e-01 | 85.4% | 81.7% |
| 2w3xB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 41.0 | 3.73e-01 | 90.3% | 86.8% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970847 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 39.0 | 4.62e-01 | 79.6% | 80.0% |
| 4343990 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 40.0 | 4.35e-01 | 91.3% | 70.6% |
| 5004462 | 3454.1.1.0 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like | 0.65 | 45.0 | 4.78e-01 | 70.9% | 96.7% |
| 3250428 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 40.0 | 3.56e-01 | 80.6% | 46.9% |
| 3609721 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.60 | 40.0 | 3.78e-01 | 80.6% | 54.6% |
| 3963716 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 35.0 | 3.48e-01 | 80.6% | 53.6% |
| 4990321 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.60 | 37.0 | 2.86e-01 | 78.6% | 27.4% |
| 3289334 | 2.2.1.0 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins | 0.58 | 43.0 | 3.25e-01 | 81.6% | 33.6% |
| 3937047 | 9.1.1.55 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7045 | 0.58 | 41.0 | 3.94e-01 | 73.8% | 80.8% |
| 3164281 | 5069.1.1.92 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › CcmF_C | 0.57 | 50.0 | 5.12e-01 | 97.1% | 100.0% |
| 3705250 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.57 | 39.0 | 3.26e-01 | 89.3% | 40.6% |
| 4991701 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.56 | 49.0 | 3.87e-01 | 96.1% | 71.6% |
| 3704832 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.55 | 41.0 | 2.70e-01 | 76.7% | 88.0% |
| 3593519 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.55 | 44.0 | 3.87e-01 | 85.4% | 81.9% |
| 3289386 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 36.0 | 3.84e-01 | 80.6% | 77.3% |
| 5064324 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.54 | 40.0 | 3.81e-01 | 77.7% | 78.3% |
| 3185314 | 10.1.1.16 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Peptidase_A4 | 0.53 | 46.0 | 3.59e-01 | 93.2% | 72.9% |
| 4021243 | 10.1.1.16 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Peptidase_A4 | 0.53 | 44.0 | 3.42e-01 | 90.3% | 68.3% |
| 2029637 | 3863.1.1.3 ↗ | beta barrels › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › EipA | 0.53 | 41.0 | 3.59e-01 | 96.1% | 54.0% |
| 169352 | 2.2.1.0 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins | 0.52 | 41.0 | 3.94e-01 | 82.5% | 88.1% |
| 4940126 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.52 | 39.0 | 3.78e-01 | 79.6% | 84.2% |
| 2803903 | 2007.2.3.21 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, PTP-SAK | 0.52 | 37.0 | 2.71e-01 | 73.8% | 51.2% |
| 3263743 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.52 | 41.0 | 3.87e-01 | 83.5% | 95.2% |
| 862806 | 4200.1.1.2 ↗ | beta barrels › YmcC-like › YmcC-like › YmcC-like › DUF3108_like | 0.52 | 43.0 | 3.41e-01 | 88.3% | 91.1% |
| 3960870 | 222.1.1.9 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N | 0.52 | 38.0 | 3.32e-01 | 77.7% | 77.5% |
| 5037639 | 5.1.2.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_130 | 0.52 | 40.0 | 2.81e-01 | 83.5% | 91.1% |
| 3957635 | 222.1.1.9 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N | 0.51 | 38.0 | 3.91e-01 | 79.6% | 92.0% |
| 3929214 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.51 | 43.0 | 3.57e-01 | 94.2% | 83.7% |
| 3288105 | 222.1.1.9 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N | 0.50 | 41.0 | 3.61e-01 | 87.4% | 80.7% |
| 1308671 | 222.1.1.20 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MFE-2_hydrat-2_N | 0.50 | 37.0 | 3.44e-01 | 77.7% | 89.3% |
| 3458192 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.50 | 40.0 | 2.86e-01 | 85.4% | 41.3% |
D4
high
residues 448-590
Domain cluster:
rep: GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00425__D172-186_596-683
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2if7B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 34.0 | 4.18e-01 | 90.2% | 100.0% |
| 2oezA01 | 2.60.440.10 | Mainly Beta › Sandwich › YacF-like › YacF-like domains | 0.54 | 30.0 | 3.98e-01 | 79.0% | 100.0% |
| 1h2cA00 | 2.70.20.20 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain | 0.53 | 38.0 | 4.10e-01 | 91.6% | 85.5% |
| 4g6iC02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.52 | 30.0 | 3.70e-01 | 90.2% | 87.2% |
| 1svbA01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.52 | 41.0 | 4.19e-01 | 95.8% | 87.5% |
| 1yc9A02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.52 | 27.0 | 3.41e-01 | 84.6% | 85.5% |
| 6gh3A01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.51 | 38.0 | 2.99e-01 | 78.3% | 87.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5075216 | 2.1.1.77 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_RpbG | 0.62 | 29.0 | 3.26e-01 | 88.8% | 54.9% |
| 3733916 | 206.1.1.82 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF7580 | 0.57 | 41.0 | 3.06e-01 | 72.7% | 61.4% |
| 3830803 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 29.0 | 3.28e-01 | 93.7% | 71.4% |
| 2388378 | 12.3.1.12 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_transf_36 | 0.51 | 38.0 | 3.02e-01 | 78.3% | 91.8% |
| 3957635 | 222.1.1.9 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N | 0.50 | 31.0 | 3.68e-01 | 81.8% | 89.0% |
D5
high
residues 690-769
Domain cluster:
rep: GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00381__D331-405
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4j27A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.67 | 54.0 | 5.24e-01 | 97.5% | 78.7% |
| 1rgxA02 | 2.60.40.4230 | Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain | 0.66 | 45.0 | 4.94e-01 | 100.0% | 89.1% |
| 2zuvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 60.0 | 5.41e-01 | 100.0% | 78.3% |
| 4wz9A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.64 | 57.0 | 4.18e-01 | 100.0% | 36.9% |
| 5e7gA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 51.0 | 5.06e-01 | 93.8% | 85.5% |
| 3irpX02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 55.0 | 4.52e-01 | 100.0% | 61.5% |
| 3fw6A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 50.0 | 4.44e-01 | 100.0% | 62.4% |
| 3bc9A01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 53.0 | 5.07e-01 | 100.0% | 83.9% |
| 4avrA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.60 | 50.0 | 4.79e-01 | 95.0% | 100.0% |
| 1df0A03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 51.0 | 4.40e-01 | 100.0% | 96.3% |
| 1nqjB00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 48.0 | 4.32e-01 | 100.0% | 64.0% |
| 3am2A02 | 2.60.120.1050 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 46.0 | 4.11e-01 | 100.0% | 59.0% |
| 3vmnA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 50.0 | 4.17e-01 | 95.0% | 73.2% |
| 4f8lA00 | 2.60.40.3590 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 50.0 | 4.19e-01 | 95.0% | 75.4% |
| 4b6zA01 | 2.60.40.3120 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 48.0 | 4.30e-01 | 96.2% | 65.5% |
| 1cgtA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 48.0 | 4.70e-01 | 97.5% | 84.9% |
| 2r7eB03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 50.0 | 4.09e-01 | 100.0% | 60.0% |
| 3qjhA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 48.0 | 4.45e-01 | 97.5% | 84.1% |
| 3bp6B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 49.0 | 4.63e-01 | 100.0% | 85.7% |
| 1xe0C00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.56 | 50.0 | 4.63e-01 | 100.0% | 95.0% |
| 4lplA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 48.0 | 4.07e-01 | 100.0% | 97.2% |
| 1nlqE00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.56 | 50.0 | 4.66e-01 | 100.0% | 98.0% |
| 1w8oA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 48.0 | 4.03e-01 | 100.0% | 55.9% |
| 1wb1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 47.0 | 4.52e-01 | 97.5% | 94.6% |
| 1qexA03 | 2.60.40.1680 | Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like | 0.56 | 49.0 | 4.40e-01 | 100.0% | 93.9% |
| 3amlA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 3.91e-01 | 87.5% | 61.7% |
| 5eo9B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 48.0 | 4.36e-01 | 98.8% | 80.0% |
| 3k1dA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 48.0 | 4.42e-01 | 97.5% | 76.0% |
| 1ut9A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 46.0 | 4.38e-01 | 95.0% | 82.7% |
| 4a37A01 | 2.60.40.3120 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 46.0 | 4.19e-01 | 95.0% | 67.3% |
| 3thdA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 43.0 | 3.67e-01 | 86.3% | 75.9% |
| 3cpxA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.55 | 39.0 | 4.21e-01 | 93.8% | 98.4% |
| 3h7lA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 46.0 | 4.46e-01 | 96.2% | 89.2% |
| 3bpsA02 | 2.60.120.690 | Mainly Beta › Sandwich › Jelly Rolls › Proprotein convertase subtilisin/kexin type 9 | 0.55 | 44.0 | 3.68e-01 | 100.0% | 48.7% |
| 4cj0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 46.0 | 4.44e-01 | 96.2% | 84.2% |
| 4apxB02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.55 | 47.0 | 4.22e-01 | 100.0% | 76.3% |
| 3amkA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 47.0 | 4.36e-01 | 96.2% | 79.0% |
| 1f6fB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 47.0 | 4.43e-01 | 98.8% | 81.4% |
| 4dqlB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 45.0 | 4.15e-01 | 95.0% | 93.6% |
| 5eb9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 4.06e-01 | 95.0% | 87.5% |
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 46.0 | 4.28e-01 | 100.0% | 76.9% |
| 1cs6A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 46.0 | 4.24e-01 | 98.8% | 76.2% |
| 5swsE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 4.04e-01 | 95.0% | 84.7% |
| 3m1hD00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 3.60e-01 | 100.0% | 100.0% |
| 6a48A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 45.0 | 3.83e-01 | 100.0% | 69.7% |
| 2huhA01 | 2.60.40.1600 | Mainly Beta › Sandwich › Immunoglobulin-like › Smr-associated-like | 0.52 | 44.0 | 3.76e-01 | 95.0% | 58.1% |
| 2e26A03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 45.0 | 3.50e-01 | 100.0% | 59.2% |
| 4bzyA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.70e-01 | 87.5% | 65.5% |
| 3k94A00 | 3.40.50.10240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain | 0.51 | 46.0 | 3.37e-01 | 100.0% | 39.7% |
| 6ovnB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.82e-01 | 95.0% | 82.1% |
| 7d9cA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 3.82e-01 | 100.0% | 72.1% |
| 2vecA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 43.0 | 3.99e-01 | 100.0% | 73.8% |
| 3c7fA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 43.0 | 3.70e-01 | 100.0% | 62.7% |
| 1sfnA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 44.0 | 3.16e-01 | 100.0% | 31.8% |
| 6grsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.99e-01 | 93.8% | 82.1% |
| 4b9gA00 | 2.60.40.3480 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 3.60e-01 | 96.2% | 85.6% |
| 1epfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 3.98e-01 | 96.2% | 85.4% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5010111 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.66 | 50.0 | 4.38e-01 | 96.2% | 52.8% |
| 4163669 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.66 | 51.0 | 4.36e-01 | 96.2% | 51.5% |
| 5039333 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 52.0 | 5.38e-01 | 100.0% | 97.3% |
| 3164679 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.63 | 47.0 | 4.40e-01 | 88.7% | 65.0% |
| 3617006 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 53.0 | 4.86e-01 | 97.5% | 84.5% |
| 4590318 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.61 | 46.0 | 4.35e-01 | 88.7% | 67.4% |
| 3355171 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 51.0 | 4.55e-01 | 96.2% | 99.2% |
| 4134920 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.61 | 46.0 | 4.28e-01 | 88.7% | 63.8% |
| 3268380 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 46.0 | 4.66e-01 | 97.5% | 83.7% |
| 4130337 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.60 | 47.0 | 4.31e-01 | 88.7% | 62.7% |
| 4048461 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.60 | 46.0 | 4.26e-01 | 87.5% | 64.8% |
| 5044775 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 51.0 | 4.69e-01 | 100.0% | 72.4% |
| 5032085 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.60 | 47.0 | 4.43e-01 | 97.5% | 70.0% |
| 3387208 | 11.1.1.148 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FixG_C | 0.59 | 53.0 | 4.52e-01 | 100.0% | 76.9% |
| 3247246 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 49.0 | 4.64e-01 | 100.0% | 75.0% |
| 4327708 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.59 | 46.0 | 4.18e-01 | 100.0% | 62.0% |
| 3575535 | 1.1.7.113 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11, AAA_12 | 0.59 | 50.0 | 3.18e-01 | 98.8% | 42.4% |
| 5040205 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 46.0 | 4.16e-01 | 95.0% | 60.9% |
| 4949296 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.59 | 50.0 | 4.12e-01 | 97.5% | 63.6% |
| 5017568 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.59 | 49.0 | 4.93e-01 | 95.0% | 97.5% |
| 4176450 | 11.1.1.59 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CagX | 0.58 | 45.0 | 4.27e-01 | 93.8% | 70.5% |
| 3546349 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.58 | 45.0 | 4.17e-01 | 100.0% | 66.0% |
| 4360808 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.58 | 51.0 | 4.72e-01 | 98.8% | 76.7% |
| 4248746 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.58 | 42.0 | 3.98e-01 | 86.3% | 63.0% |
| 3338010 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.58 | 46.0 | 4.77e-01 | 100.0% | 96.0% |
| 4451321 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.58 | 45.0 | 4.09e-01 | 87.5% | 64.3% |
| 3277040 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.57 | 50.0 | 4.49e-01 | 98.8% | 75.4% |
| 4989278 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.57 | 46.0 | 4.05e-01 | 96.2% | 57.6% |
| 3227068 | 11.1.1.1085 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GBD_IRG7_N | 0.57 | 48.0 | 4.51e-01 | 100.0% | 76.0% |
| 3238303 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 49.0 | 4.45e-01 | 97.5% | 88.2% |
| 5031748 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.57 | 48.0 | 4.19e-01 | 96.2% | 60.8% |
| 3539739 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.57 | 44.0 | 4.34e-01 | 100.0% | 77.6% |
| 2031885 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.57 | 43.0 | 3.92e-01 | 87.5% | 59.8% |
| 5046033 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 49.0 | 4.23e-01 | 98.8% | 96.2% |
| 4342482 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 46.0 | 4.36e-01 | 90.0% | 100.0% |
| 3735749 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 49.0 | 3.82e-01 | 100.0% | 74.4% |
| 3987995 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 44.0 | 4.60e-01 | 93.8% | 100.0% |
| 4563164 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.56 | 47.0 | 4.25e-01 | 97.5% | 74.8% |
| 5026423 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 50.0 | 4.55e-01 | 100.0% | 89.5% |
| 3093592 | 12.1.1.21 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_66 | 0.55 | 48.0 | 4.18e-01 | 97.5% | 70.7% |
| 1162196 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.55 | 48.0 | 4.28e-01 | 97.5% | 80.0% |
| 4012606 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.55 | 47.0 | 4.20e-01 | 97.5% | 66.1% |
| 5048726 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 45.0 | 4.17e-01 | 100.0% | 70.5% |
| 4949535 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.55 | 46.0 | 3.80e-01 | 96.2% | 54.2% |
| 3264441 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 47.0 | 4.55e-01 | 100.0% | 84.2% |
| 3275421 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 42.0 | 4.44e-01 | 96.2% | 97.1% |
| 3955052 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 46.0 | 4.18e-01 | 100.0% | 67.3% |
| 5068358 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 47.0 | 4.19e-01 | 96.2% | 83.5% |
| 5078307 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.54 | 44.0 | 4.52e-01 | 93.8% | 97.3% |
| 1883373 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 46.0 | 4.01e-01 | 98.8% | 62.0% |
| 3929899 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 3.93e-01 | 93.8% | 85.8% |
| 5083787 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 46.0 | 4.37e-01 | 97.5% | 82.1% |
| 4182351 | 11.1.1.34 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Reeler | 0.53 | 45.0 | 3.90e-01 | 98.8% | 77.0% |
| 3264437 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 4.15e-01 | 96.2% | 81.9% |
| 5081702 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 46.0 | 4.08e-01 | 100.0% | 79.2% |
| 3272321 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 4.06e-01 | 97.5% | 79.1% |
| 3251518 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 4.02e-01 | 95.0% | 80.0% |
| 3893729 | 10.4.1.4 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › C5_CUB | 0.52 | 46.0 | 4.14e-01 | 100.0% | 96.4% |
| 4049751 | 11.1.1.148 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FixG_C | 0.52 | 45.0 | 4.07e-01 | 100.0% | 86.1% |
| 2771335 | 11.1.1.46 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha-amylase_N | 0.52 | 44.0 | 3.86e-01 | 100.0% | 72.3% |
| 3258219 | 11.1.1.793 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 | 0.51 | 43.0 | 4.03e-01 | 98.8% | 77.0% |
| 1198 | 10.2.1.31 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin | 0.51 | 44.0 | 4.07e-01 | 100.0% | 99.0% |
| 3231572 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 43.0 | 4.04e-01 | 100.0% | 98.0% |
| 5074618 | 304.48.1.31 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Cas10-Cmr2_palm2 | 0.50 | 44.0 | 2.97e-01 | 100.0% | 31.9% |
D6
medium
residues 299-446
D7
medium
residues 1067-1158
Domain cluster:
rep: KJ746502.1__AID18326.1__PPF1_13__00013__D417-496
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hxlA05 | 3.30.360.90 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.84 | 52.0 | 5.92e-01 | 78.3% | 82.6% |
| 3t5xA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 30.0 | 3.35e-01 | 78.3% | 56.9% |
| 1b96A00 | 3.40.600.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II | 0.61 | 43.0 | 3.21e-01 | 73.9% | 63.1% |
| 1uw4A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 31.0 | 3.14e-01 | 76.1% | 51.6% |
| 4xxfA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.54 | 40.0 | 2.99e-01 | 79.3% | 47.0% |
| 3nytA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 36.0 | 3.37e-01 | 70.7% | 100.0% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.53 | 29.0 | 3.28e-01 | 72.8% | 73.0% |
| 6jpaA01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.50 | 36.0 | 3.11e-01 | 75.0% | 73.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3165637 | 283.2.1.2 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C | 0.77 | 65.0 | 5.92e-01 | 90.2% | 69.2% |
| 3791934 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.61 | 52.0 | 3.37e-01 | 93.5% | 90.8% |
| 3599899 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.60 | 42.0 | 2.60e-01 | 71.7% | 91.4% |
| 3213954 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.59 | 42.0 | 3.32e-01 | 73.9% | 61.6% |
| 5001510 | 2003.1.5.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr | 0.56 | 41.0 | 2.71e-01 | 75.0% | 27.2% |
| 3492286 | 301.8.1.3 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › AASDHPPT_N | 0.54 | 39.0 | 3.82e-01 | 76.1% | 89.3% |
| 3888181 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.54 | 42.0 | 2.91e-01 | 87.0% | 95.7% |
| 4137234 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.51 | 37.0 | 2.72e-01 | 75.0% | 90.0% |