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GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00435

Bact-Vir

GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00435

Identity

Kingdom:
phage

Quality

77.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-69
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vz9B00 3.30.457.50 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 0.71 48.0 4.16e-01 70.1% 78.6%
7q04F01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.68 47.0 4.06e-01 73.1% 62.4%
3r7wB02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.66 47.0 3.95e-01 76.1% 51.7%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 44.0 4.61e-01 79.1% 78.7%
1nbwA04 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 52.0 4.18e-01 92.5% 90.2%
1ykdB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.62 53.0 3.91e-01 97.0% 59.9%
2k49A00 2.30.29.80 Mainly Beta › Roll › PH-domain like › 0.61 46.0 3.88e-01 82.1% 93.2%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 45.0 3.45e-01 79.1% 71.0%
1q90C00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.60 41.0 3.44e-01 73.1% 57.9%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 47.0 3.62e-01 86.6% 42.6%
3cetB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 46.0 3.94e-01 88.1% 66.4%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 39.0 3.87e-01 73.1% 78.9%
4jpqA00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 48.0 3.46e-01 100.0% 72.6%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 41.0 4.41e-01 83.6% 89.7%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.55 35.0 3.13e-01 83.6% 43.6%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.55 44.0 3.37e-01 94.0% 74.2%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 37.0 4.04e-01 71.6% 100.0%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 44.0 2.88e-01 88.1% 51.9%
2uurA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.32e-01 98.5% 74.8%
1ikpA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.22e-01 97.0% 66.4%
1n02A00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.53 42.0 3.67e-01 86.6% 79.4%
1epwA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 44.0 3.14e-01 95.5% 46.8%
1dgmA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.53 46.0 3.10e-01 100.0% 37.0%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.53 41.0 3.56e-01 86.6% 82.4%
1xdiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 41.0 2.92e-01 86.6% 34.4%
3kstA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 42.0 2.90e-01 94.0% 82.5%
3dorA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.52 35.0 3.07e-01 70.1% 94.4%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 37.0 3.65e-01 76.1% 86.7%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 41.0 2.57e-01 86.6% 50.5%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.52 44.0 3.84e-01 100.0% 72.7%
2p9rA00 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.52 40.0 3.58e-01 88.1% 93.1%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.51 39.0 3.57e-01 85.1% 87.8%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.00e-01 97.0% 47.0%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.51 39.0 3.55e-01 98.5% 59.6%
2wtzA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.50 42.0 3.01e-01 100.0% 47.4%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.50 40.0 3.29e-01 88.1% 57.9%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4625348 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.71 43.0 4.60e-01 70.1% 70.0%
4595815 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.70 43.0 4.43e-01 70.1% 64.6%
4008807 223.1.1.52 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE9 0.68 56.0 3.84e-01 92.5% 53.5%
4129953 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.67 42.0 4.29e-01 70.1% 64.6%
4492087 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.67 42.0 4.25e-01 70.1% 64.6%
3781956 4099.1.1.3 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spc24 0.65 44.0 4.29e-01 70.1% 88.0%
4333320 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.60 41.0 4.24e-01 76.1% 73.8%
4182291 223.1.1.5 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA 0.60 43.0 2.93e-01 76.1% 77.6%
3263647 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 47.0 3.92e-01 86.6% 51.7%
3839768 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 49.0 3.08e-01 89.6% 18.9%
4090143 298.1.1.38 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › OpcA_G6PD_C 0.59 43.0 3.18e-01 77.6% 58.3%
4566232 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.57 45.0 2.97e-01 86.6% 30.0%
5054141 2.14.1.0 ↗ beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like 0.57 39.0 4.31e-01 79.1% 94.0%
3659855 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 43.0 4.10e-01 82.1% 98.8%
3952520 2003.1.2.63 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N, GMC_oxred_C, NAD_binding_8 0.56 44.0 2.73e-01 86.6% 31.2%
3210163 5.1.4.100 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N 0.56 45.0 2.73e-01 88.1% 88.9%
5022798 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 39.0 2.35e-01 73.1% 16.9%
3295837 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.56 49.0 3.57e-01 98.5% 43.8%
3378540 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.56 48.0 3.55e-01 98.5% 43.8%
1877618 330.15.1.1 ↗ a+b two layers › dsRBD-like › VtrA protein periplasmic domain › VtrA protein periplasmic domain › VtrA_C 0.55 38.0 3.54e-01 74.6% 93.3%
4944386 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 47.0 4.06e-01 100.0% 90.9%
4929336 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.54 41.0 3.25e-01 83.6% 72.3%
4027676 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 48.0 3.02e-01 100.0% 46.8%
5053926 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.54 44.0 4.14e-01 88.1% 86.3%
4038272 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.54 43.0 3.82e-01 86.6% 83.2%
4183744 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.54 43.0 3.74e-01 86.6% 80.0%
4398495 109.21.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 0.53 42.0 2.46e-01 92.5% 42.3%
3786015 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.53 42.0 2.45e-01 92.5% 43.7%
4210722 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.53 42.0 3.70e-01 86.6% 78.0%
4049598 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.53 42.0 3.69e-01 86.6% 77.0%
4073485 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.53 44.0 3.91e-01 98.5% 84.8%
4280539 109.21.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 0.53 41.0 2.42e-01 92.5% 40.3%
4314572 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.53 41.0 3.62e-01 85.1% 77.0%
4373440 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 42.0 3.74e-01 86.6% 86.3%
4232558 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 41.0 3.61e-01 85.1% 81.0%
4413603 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 41.0 3.59e-01 85.1% 81.0%
3268089 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 44.0 3.70e-01 100.0% 85.6%
4317234 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 43.0 3.90e-01 98.5% 89.0%
3789900 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.52 43.0 3.51e-01 95.5% 100.0%
4405947 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 43.0 3.90e-01 98.5% 86.0%
3783252 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 46.0 2.88e-01 100.0% 37.8%
4524904 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 43.0 3.89e-01 98.5% 88.0%
4566718 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 41.0 3.75e-01 86.6% 80.0%
4067945 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.51 41.0 3.55e-01 86.6% 77.1%
4062936 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.51 41.0 3.54e-01 86.6% 72.4%
3585414 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.51 42.0 3.63e-01 92.5% 75.5%
4072334 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.51 41.0 3.59e-01 86.6% 84.0%
3935967 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.51 46.0 2.95e-01 100.0% 36.8%
4065841 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.51 41.0 3.70e-01 88.1% 78.9%
4385005 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.51 40.0 3.57e-01 85.1% 85.3%
4426619 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.51 41.0 3.62e-01 86.6% 84.2%
3815957 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.51 44.0 2.86e-01 100.0% 32.8%
4036940 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.50 40.0 3.58e-01 86.6% 70.5%
4355046 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.50 41.0 3.76e-01 97.0% 92.6%
4265681 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.50 41.0 3.72e-01 98.5% 86.0%