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GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00446

Bact-Vir

GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00446

Identity

Kingdom:
phage

Quality

49.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 186-240
PDB
Domain cluster: representative
CATH (82)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 59.0 6.40e-01 72.7% 93.2%
3m8jA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.83 62.0 5.22e-01 96.4% 48.9%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 56.0 5.78e-01 78.2% 82.4%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 55.0 5.90e-01 85.5% 93.3%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 56.0 5.28e-01 80.0% 65.2%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 59.0 5.95e-01 85.5% 92.7%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 50.0 5.08e-01 72.7% 72.2%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.74 63.0 5.15e-01 96.4% 53.4%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 49.0 4.60e-01 94.5% 59.7%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 4.97e-01 74.5% 85.2%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 4.71e-01 87.3% 64.1%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 4.73e-01 100.0% 65.1%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 51.0 5.17e-01 80.0% 80.4%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.69 48.0 3.95e-01 89.1% 41.2%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 47.0 5.12e-01 70.9% 100.0%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.69 60.0 3.89e-01 100.0% 39.8%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 50.0 4.41e-01 100.0% 53.8%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 50.0 5.16e-01 92.7% 84.6%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.67 47.0 4.73e-01 74.5% 82.1%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 51.0 4.82e-01 100.0% 68.7%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 4.51e-01 100.0% 59.2%
4eqqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 46.0 4.90e-01 74.5% 97.9%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 56.0 5.40e-01 100.0% 85.7%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 4.47e-01 85.5% 61.1%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 53.0 4.52e-01 100.0% 54.3%
1xd7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 3.81e-01 80.0% 40.5%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 4.65e-01 92.7% 68.7%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.65 47.0 4.50e-01 87.3% 64.7%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 43.0 4.14e-01 94.5% 60.3%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 4.59e-01 94.5% 69.2%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 47.0 4.60e-01 80.0% 86.9%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 4.07e-01 87.3% 51.2%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 3.37e-01 94.5% 27.8%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.59e-01 87.3% 71.4%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 4.11e-01 94.5% 42.5%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 49.0 3.73e-01 92.7% 33.8%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.64 45.0 3.36e-01 87.3% 28.9%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.72e-01 94.5% 86.0%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 4.34e-01 81.8% 70.7%
2o3fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 4.56e-01 94.5% 61.0%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 46.0 4.58e-01 80.0% 76.3%
2lvsA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 44.0 4.59e-01 74.5% 89.8%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.88e-01 87.3% 87.0%
2zb9A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 48.0 4.97e-01 81.8% 98.0%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 4.54e-01 100.0% 80.0%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 44.0 3.35e-01 94.5% 31.3%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.62 48.0 3.66e-01 100.0% 34.5%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 4.66e-01 100.0% 80.0%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 3.38e-01 100.0% 29.8%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 47.0 3.69e-01 94.5% 37.7%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 49.0 4.33e-01 100.0% 60.2%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 44.0 4.12e-01 92.7% 62.9%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 42.0 4.00e-01 94.5% 63.1%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 42.0 4.42e-01 92.7% 87.2%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 46.0 4.52e-01 87.3% 78.3%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 50.0 4.65e-01 100.0% 84.0%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 3.68e-01 94.5% 40.3%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 3.78e-01 100.0% 45.7%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 48.0 4.60e-01 100.0% 81.2%
3mvpA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 41.0 4.30e-01 76.4% 100.0%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 47.0 4.65e-01 100.0% 85.2%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 3.46e-01 89.1% 46.4%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 48.0 3.70e-01 98.2% 67.1%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 48.0 3.66e-01 98.2% 68.3%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.57 47.0 3.74e-01 100.0% 52.7%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 43.0 4.62e-01 81.8% 100.0%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 43.0 3.95e-01 98.2% 60.5%
2j5oA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 4.06e-01 90.9% 70.8%
2id3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 43.0 4.54e-01 83.6% 98.0%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 3.43e-01 92.7% 51.3%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 4.51e-01 92.7% 87.7%
1oisA01 1.10.10.41 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Yeast DNA topoisomerase - domain 1 0.57 45.0 3.95e-01 94.5% 83.7%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 44.0 3.49e-01 94.5% 38.6%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 46.0 3.33e-01 90.9% 75.5%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 3.63e-01 98.2% 66.4%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 4.31e-01 98.2% 94.4%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.85e-01 83.6% 91.7%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 4.00e-01 92.7% 67.6%
4jykA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.55 44.0 4.41e-01 92.7% 91.4%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.55 39.0 3.96e-01 80.0% 100.0%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 42.0 4.02e-01 100.0% 72.3%
3kd3A02 1.10.150.210 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 0.54 38.0 3.73e-01 74.5% 78.3%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3477654 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.90 65.0 6.56e-01 76.4% 83.6%
3239905 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.88 63.0 5.34e-01 74.5% 49.4%
3389609 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.86 66.0 6.00e-01 80.0% 62.9%
3410592 101.1.8.25 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_psq 0.86 64.0 6.44e-01 80.0% 78.2%
3877765 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.86 58.0 6.64e-01 70.9% 100.0%
3567273 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.85 60.0 6.51e-01 74.5% 93.3%
3970884 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.82 58.0 4.81e-01 74.5% 45.3%
3469752 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.82 57.0 6.19e-01 72.7% 91.1%
3620216 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 73.0 6.20e-01 100.0% 62.4%
5010276 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.81 69.0 5.25e-01 100.0% 40.8%
4060647 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.80 56.0 5.36e-01 76.4% 63.1%
3926525 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.80 55.0 6.11e-01 74.5% 100.0%
3590753 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 58.0 6.05e-01 80.0% 86.0%
3953011 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 57.0 5.72e-01 78.2% 76.4%
4393383 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.78 53.0 5.98e-01 87.3% 97.5%
4280807 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.78 55.0 5.55e-01 74.5% 78.2%
4944760 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 65.0 6.35e-01 100.0% 88.3%
3256356 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 52.0 4.98e-01 70.9% 62.5%
3983411 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.76 54.0 4.85e-01 81.8% 54.7%
4966195 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.76 60.0 5.59e-01 87.3% 75.7%
4945289 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 57.0 5.56e-01 85.5% 75.0%
3579624 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 64.0 5.69e-01 96.4% 65.0%
4293871 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.75 54.0 5.42e-01 76.4% 76.4%
5051712 101.1.4.90 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_23 0.75 52.0 5.23e-01 72.7% 74.5%
3800176 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 67.0 5.81e-01 100.0% 64.7%
3998880 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 67.0 5.58e-01 100.0% 57.9%
3620215 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.75 67.0 4.56e-01 100.0% 58.4%
3793383 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.75 66.0 6.30e-01 100.0% 84.6%
3401087 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.74 52.0 5.43e-01 76.4% 86.0%
3793393 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 67.0 5.87e-01 100.0% 68.8%
3786618 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.74 54.0 4.14e-01 78.2% 36.3%
3873677 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.73 52.0 4.85e-01 76.4% 62.9%
3706139 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 55.0 5.75e-01 98.2% 92.0%
3701286 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.73 54.0 5.58e-01 90.9% 88.0%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.73 53.0 5.32e-01 80.0% 78.2%
5034899 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.73 64.0 4.23e-01 98.2% 60.5%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.72 52.0 4.71e-01 80.0% 56.0%
3587644 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.72 60.0 5.83e-01 90.9% 90.0%
3968008 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.72 51.0 5.33e-01 94.5% 84.0%
5027752 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 62.0 5.53e-01 100.0% 73.8%
3978988 7565.1.1.0 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.71 51.0 3.55e-01 83.6% 23.3%
5064868 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.71 49.0 4.21e-01 72.7% 46.7%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.71 50.0 4.71e-01 76.4% 62.9%
3908686 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 60.0 4.96e-01 100.0% 55.2%
4626289 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.70 51.0 4.87e-01 78.2% 70.8%
3301179 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.70 60.0 5.53e-01 100.0% 77.3%
3834548 101.1.3.12 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 0.69 60.0 5.73e-01 100.0% 89.2%
3284051 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.69 50.0 4.73e-01 94.5% 64.6%
4992556 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.69 50.0 4.11e-01 78.2% 41.0%
3913655 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.69 57.0 5.15e-01 96.4% 70.0%
3282225 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.69 48.0 4.31e-01 89.1% 51.2%
3376425 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.69 55.0 4.85e-01 100.0% 58.8%
4303963 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.69 48.0 4.39e-01 89.1% 54.7%
5072014 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.68 49.0 4.46e-01 76.4% 57.3%
None 0.68 59.0 3.82e-01 98.2% 51.4%
4980021 101.1.3.33 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 0.68 50.0 4.70e-01 100.0% 62.9%
5060990 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.68 60.0 3.80e-01 100.0% 48.0%
3283500 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.68 49.0 5.12e-01 80.0% 96.0%
1810916 101.1.1.71 alpha arrays › HTH › HTH › Three-helical HTH › KORA 0.68 55.0 5.27e-01 100.0% 78.5%
4174590 101.1.2.61 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.67 51.0 4.93e-01 85.5% 80.0%
5065596 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.67 48.0 4.33e-01 78.2% 53.8%
2511579 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.67 56.0 4.89e-01 100.0% 64.4%
3971860 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.67 52.0 5.41e-01 96.4% 96.0%
4683276 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.67 52.0 4.36e-01 94.5% 49.5%
4862439 101.1.1.71 alpha arrays › HTH › HTH › Three-helical HTH › KORA 0.66 54.0 4.39e-01 100.0% 47.7%
3971149 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.66 48.0 4.34e-01 100.0% 55.0%
4947436 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 51.0 5.11e-01 98.2% 87.3%
3283604 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.65 55.0 4.66e-01 100.0% 72.0%
5002651 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.65 48.0 4.11e-01 81.8% 51.6%
4944726 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 51.0 5.00e-01 100.0% 81.7%
3289370 101.1.1.300 alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.65 55.0 4.65e-01 100.0% 72.0%
2792505 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.65 50.0 4.96e-01 92.7% 82.5%
4099721 101.1.3.24 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF27685 0.65 55.0 4.63e-01 100.0% 57.0%
4863786 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.65 50.0 5.05e-01 85.5% 90.9%
3943810 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.64 52.0 5.06e-01 100.0% 92.3%
4965642 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.64 53.0 3.96e-01 100.0% 36.9%
4654073 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.64 49.0 4.48e-01 85.5% 64.0%
4350602 101.1.8.14 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 0.64 49.0 4.72e-01 87.3% 72.3%
5051680 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.64 46.0 4.20e-01 80.0% 55.0%
3944389 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.63 52.0 4.69e-01 100.0% 84.7%
3961604 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.63 49.0 4.10e-01 94.5% 48.0%
4945127 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 50.0 4.47e-01 100.0% 60.0%
3279339 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.63 48.0 3.41e-01 94.5% 25.9%
3967026 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.62 51.0 4.69e-01 100.0% 69.3%
3973360 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.62 51.0 4.75e-01 100.0% 74.3%
4939711 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 50.0 4.34e-01 100.0% 56.8%
3967748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.61 50.0 4.43e-01 100.0% 61.2%
3163616 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.61 51.0 4.33e-01 94.5% 86.2%
4243530 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.61 48.0 4.60e-01 100.0% 75.4%
3284469 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.60 49.0 4.54e-01 100.0% 70.7%
3959876 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.60 51.0 4.20e-01 96.4% 89.0%
4178355 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.58 48.0 4.12e-01 100.0% 74.0%
3288983 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.56 41.0 4.08e-01 83.6% 96.7%
4007690 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.55 41.0 4.19e-01 87.3% 100.0%
3974513 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.55 39.0 4.13e-01 92.7% 97.8%
3288236 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.54 43.0 3.86e-01 100.0% 74.4%
3289886 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.54 43.0 3.72e-01 100.0% 74.3%
D2 high residues 309-429
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 36.0 3.91e-01 70.2% 64.1%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.61 36.0 3.97e-01 77.7% 70.3%
4irnA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.57 39.0 4.00e-01 81.8% 70.6%
1hw1A02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.55 40.0 3.74e-01 88.4% 60.9%
3s84A02 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.54 25.0 2.32e-01 78.5% 31.2%
1o5hA00 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.50 35.0 3.00e-01 70.2% 82.0%
2oyoA02 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.50 41.0 4.11e-01 88.4% 87.2%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4260974 601.4.1.53 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › FUSC 0.56 41.0 3.69e-01 76.9% 80.6%
3965437 604.5.1.0 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.56 41.0 3.62e-01 77.7% 91.4%
4039850 601.1.1.89 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › FUSC 0.55 40.0 3.60e-01 76.9% 78.3%
4643195 601.4.1.53 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › FUSC 0.54 40.0 3.58e-01 76.9% 90.6%
3943375 192.29.1.120 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › FUSC 0.54 40.0 3.60e-01 78.5% 80.0%
3591400 1188.1.1.1 alpha bundles › ZIP zinc transporter › ZIP zinc transporter › ZIP zinc transporter › Zip 0.54 43.0 3.38e-01 87.6% 61.0%
3920800 1075.5.1.6 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › ANKH 0.52 40.0 3.25e-01 81.8% 75.0%
3714029 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.52 37.0 3.23e-01 74.4% 90.0%
4948636 604.5.1.1 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU_div 0.51 39.0 3.26e-01 80.2% 61.4%
3970616 601.4.1.3 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › 4HB_MCP_1 0.51 37.0 3.47e-01 74.4% 69.0%
3573678 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.51 37.0 3.18e-01 74.4% 78.5%
5046993 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.51 36.0 3.11e-01 74.4% 77.6%
3629841 5050.1.1.8 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › FPN1 0.50 40.0 3.24e-01 85.1% 84.9%
4930318 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.50 36.0 3.56e-01 74.4% 77.7%