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GP23

Euk-Vir

Caviid_betaherpesvirus_2

GP23__YP_007417795__Caviid_betaherpesvirus_2__33706

Identity

Accession:: YP_007417795 ↗
Protein ID:: GP23
Kingdom:: euk

Quality

70.5 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Quwivirus› Caviid_betaherpesvirus_2

TaxID: 33706

Cluster

View cluster (80 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-139

PDB

Domain cluster: rep: Cy40__YP_009337474__Cynomolgus_cytomegalovirus__1919083__D38-135

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02393.22 best	US22	42.5	8.90e-11	94.8%	94.3%

D2 high residues 148-282

PDB

Domain cluster: rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1ei5A02	2.40.128.50	Mainly Beta › Beta Barrel › Lipocalin ›	0.61	34.0	4.15e-01	82.2%	87.8%
1olzA01	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.55	44.0	3.03e-01	85.2%	96.8%
5h1kB02	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.54	43.0	3.25e-01	85.2%	81.9%
1yqfB00	3.10.280.10	Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein	0.53	36.0	3.35e-01	84.4%	52.5%
4u3qB00	2.40.128.640	Mainly Beta › Beta Barrel › Lipocalin ›	0.52	36.0	4.12e-01	70.4%	97.0%
3hrpA02	2.120.10.30	Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain	0.51	42.0	3.27e-01	88.9%	98.4%
6vp6A03	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.51	42.0	3.18e-01	89.6%	94.8%
4r7rA00	3.30.1490.410	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883	0.51	33.0	3.46e-01	74.1%	72.1%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3998439	243.6.1.4 ↗	a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA	0.60	37.0	4.33e-01	77.8%	88.4%
3941042	5.1.4.62 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN	0.57	43.0	3.16e-01	77.0%	97.7%
3912697	292.2.1.3 ↗	a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB2	0.56	31.0	3.41e-01	72.6%	65.5%
3404770	5.1.4.175 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT122_2nd	0.55	42.0	3.29e-01	79.3%	72.2%
3601275	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.53	45.0	3.24e-01	94.1%	98.4%
142988	243.6.1.4 ↗	a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA	0.53	35.0	4.09e-01	76.3%	98.9%
3220436	241.4.1.1 ↗	a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom	0.52	42.0	3.97e-01	89.6%	71.7%
5048065	295.1.1.0 ↗	a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain	0.52	29.0	3.31e-01	84.4%	73.0%
3596391	5.1.4.149 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR54	0.51	43.0	3.24e-01	89.6%	85.2%
4390515	71.1.1.3 ↗	beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB	0.51	31.0	2.95e-01	86.7%	50.0%