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GP29.1

Euk-Vir

Caviid_betaherpesvirus_2

GP29.1__YP_007417803__Caviid_betaherpesvirus_2__33706

Identity

Accession:
YP_007417803 ↗
Protein ID:
GP29.1
Kingdom:
euk

Quality

69.2 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Quwivirus› Caviid_betaherpesvirus_2

TaxID: 33706

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-132
PDB
Domain cluster: rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02393.22 best US22 52.4 7.60e-14 88.5% 96.8%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4q1vA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.58 43.0 2.94e-01 76.9% 33.7%
1genA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.57 45.0 3.94e-01 85.4% 97.5%
6eotD01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.55 45.0 2.97e-01 86.2% 39.8%
1itvA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.55 44.0 3.87e-01 85.4% 97.9%
4ci8A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 43.0 3.26e-01 83.1% 55.6%
3cxbA01 3.30.2440.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein SifA fold › Secreted effector protein SifA 0.55 38.0 4.01e-01 87.7% 80.0%
2idaA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.53 31.0 3.67e-01 82.3% 85.2%
1qhuA01 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.52 42.0 3.73e-01 85.4% 100.0%
4bhrA00 3.30.1300.70 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.52 30.0 3.57e-01 73.1% 88.9%
7x36A01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 44.0 3.31e-01 93.8% 94.5%
4aezA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 3.30e-01 94.6% 79.1%
1ng5B00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.51 41.0 3.55e-01 87.7% 98.5%
2dg1C00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 45.0 3.38e-01 97.7% 82.5%
3cihA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 34.0 3.48e-01 96.9% 71.5%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 44.0 3.23e-01 97.7% 88.0%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 45.0 3.44e-01 99.2% 94.1%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.50 42.0 3.14e-01 91.5% 65.6%
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 38.0 2.77e-01 79.2% 32.0%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3787609 5.1.4.219 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DPPIV_N 0.58 44.0 2.94e-01 79.2% 31.2%
4029138 5.1.4.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Coatomer_WDAD 0.58 47.0 3.50e-01 86.2% 91.4%
3305160 5.1.5.185 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_RIC1_2nd 0.58 48.0 2.95e-01 88.5% 49.1%
3270014 5.1.4.223 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.57 47.0 3.30e-01 89.2% 80.2%
3812094 5.1.4.223 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.57 47.0 3.42e-01 88.5% 86.0%
3472174 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 44.0 3.00e-01 82.3% 38.1%
3485537 5.1.4.223 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.56 44.0 3.00e-01 85.4% 48.2%
3940712 5.1.4.223 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.56 46.0 2.80e-01 87.7% 46.7%
3614378 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.55 40.0 3.11e-01 75.4% 90.5%
3441598 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.55 46.0 3.42e-01 87.7% 93.1%
2736140 5.1.5.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N,Dpp_8_9_N 0.55 44.0 2.88e-01 86.2% 36.1%
3940911 5.1.4.179 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 0.54 42.0 2.98e-01 81.5% 41.6%
3994028 5.1.3.205 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_RIC1_2nd 0.54 44.0 2.77e-01 89.2% 28.1%
3741319 5.1.4.223 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.54 42.0 3.35e-01 82.3% 53.8%
3496183 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 43.0 2.76e-01 86.2% 33.4%
3597898 5.1.11.13 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_RIC1_2nd 0.52 43.0 2.64e-01 89.2% 36.1%
3713176 5.1.4.223 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.52 41.0 2.97e-01 84.6% 50.0%
3995302 5.1.4.158 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_HPS5 0.52 40.0 2.82e-01 82.3% 39.8%
3789064 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.52 40.0 2.90e-01 81.5% 42.2%
3195787 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 45.0 3.50e-01 96.2% 91.9%
3875021 5.1.4.158 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_HPS5 0.51 46.0 3.25e-01 100.0% 81.2%
4025866 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 3.23e-01 93.8% 95.7%
3395174 5.1.4.158 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_HPS5 0.51 46.0 3.38e-01 100.0% 89.3%
3672663 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.51 44.0 3.33e-01 95.4% 65.8%
3261418 5.1.4.453 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_KLHDC2_KLHL20_DRC7 0.51 43.0 3.10e-01 91.5% 97.9%
3929694 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 45.0 3.05e-01 100.0% 45.0%
3803782 5.1.4.550 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.51 38.0 2.83e-01 77.7% 52.2%
3419448 5.1.4.166 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_DCAF4 0.50 44.0 3.01e-01 95.4% 87.7%
3403609 247.1.1.38 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C 0.50 29.0 3.48e-01 84.6% 89.9%