←Back to structures
GP37
Euk-VirCaviid_betaherpesvirus_2
GP37__YP_007417810__Caviid_betaherpesvirus_2__33706
Identity
- Accession:
- YP_007417810 ↗
- Protein ID:
- GP37
- Kingdom:
- euk
Quality
70.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Quwivirus›
Caviid_betaherpesvirus_2
TaxID: 33706
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-246
Domain cluster:
rep: Glycoprotein_present_at_IE_times__YP_214049__Murid_betaherpesvirus_1__10366__D54-269
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a6zA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.73 | 56.0 | 6.19e-01 | 80.5% | 95.5% |
| 7zqiA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.70 | 54.0 | 5.95e-01 | 81.4% | 97.2% |
| 1hyrC01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.69 | 53.0 | 5.81e-01 | 80.5% | 96.7% |
| 4g59B00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.68 | 48.0 | 5.56e-01 | 80.5% | 97.5% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 22.0 | 3.68e-01 | 100.0% | 96.0% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 31.0 | 3.88e-01 | 92.7% | 94.5% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.52 | 24.0 | 3.28e-01 | 92.7% | 84.4% |
| 5evhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 28.0 | 3.59e-01 | 90.5% | 90.9% |
| 2fs2B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 27.0 | 3.32e-01 | 81.4% | 77.5% |
| 2dslA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 25.0 | 3.29e-01 | 79.1% | 87.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3842370 | 233.1.1.0 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain | 0.73 | 54.0 | 6.03e-01 | 80.5% | 95.4% |
| 3917386 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.72 | 54.0 | 6.06e-01 | 81.4% | 97.7% |
| 3752681 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.71 | 54.0 | 5.84e-01 | 80.5% | 90.0% |
| 3859354 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.71 | 54.0 | 5.92e-01 | 80.5% | 95.0% |
| 3553889 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.70 | 54.0 | 5.72e-01 | 80.5% | 89.2% |
| 3758349 | 233.1.1.5 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_2 | 0.68 | 48.0 | 5.50e-01 | 80.5% | 96.4% |
| 3907478 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.67 | 52.0 | 5.66e-01 | 81.4% | 96.7% |
| 3805804 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.60 | 26.0 | 3.94e-01 | 75.9% | 100.0% |
| 3223862 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.58 | 35.0 | 3.64e-01 | 100.0% | 63.4% |
| 3394965 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.58 | 34.0 | 3.62e-01 | 100.0% | 64.0% |
| 858 | 9.3.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Qn_am_d_aII | 0.52 | 24.0 | 3.16e-01 | 93.2% | 77.3% |
| 2716251 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.52 | 26.0 | 3.45e-01 | 94.1% | 86.7% |
| 4007182 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.51 | 27.0 | 3.31e-01 | 81.8% | 80.0% |
| 4303631 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.50 | 26.0 | 3.09e-01 | 80.5% | 70.7% |