←Back to structures

GP84

Euk-Vir

Caviid_betaherpesvirus_2

GP84__YP_007417850__Caviid_betaherpesvirus_2__33706

Identity

Accession:
YP_007417850 ↗
Protein ID:
GP84
Kingdom:
euk

Quality

57.6 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Quwivirus› Caviid_betaherpesvirus_2

TaxID: 33706

Cluster

View cluster (43 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 140-287
PDB
Domain cluster: rep: protein_UL84__YP_004940247__Saimiriine_betaherpesvirus_4__1535247__D144-278
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ne5C02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.67 45.0 5.27e-01 73.0% 97.1%
7uwjC01 2.60.40.2160 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 0.64 39.0 4.32e-01 95.3% 74.4%
3ndzE00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 37.0 4.28e-01 80.4% 78.5%
2fbjH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 31.0 4.16e-01 81.1% 93.2%
6cqeA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 36.0 4.59e-01 81.8% 98.8%
4tkoB01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.61 38.0 4.60e-01 76.4% 100.0%
4b60A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 45.0 4.57e-01 84.5% 79.0%
2vo8A00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 39.0 4.09e-01 81.8% 70.4%
1t7vA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 33.0 4.06e-01 77.7% 87.8%
5suhB01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.58 34.0 4.09e-01 79.7% 86.9%
4iefA00 2.60.40.3800 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 46.0 4.22e-01 83.8% 87.5%
3kptA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 39.0 4.03e-01 80.4% 72.3%
1dn0D02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 33.0 3.90e-01 76.4% 86.2%
3a7fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 36.0 4.32e-01 81.8% 98.9%
4igbB02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 40.0 4.11e-01 82.4% 74.8%
2zf9A00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 38.0 3.56e-01 80.4% 54.3%
2g1dA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 33.0 3.89e-01 85.1% 85.7%
4q9bA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 34.0 3.94e-01 77.0% 86.1%
1ex0A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 32.0 3.87e-01 78.4% 87.4%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 33.0 4.18e-01 79.7% 98.9%
3rnsA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 33.0 3.91e-01 81.1% 87.0%
3h8uA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 34.0 3.74e-01 82.4% 74.6%
3rnsA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 33.0 3.79e-01 82.4% 80.6%
2b8mA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 33.0 3.78e-01 81.1% 81.7%
2fqpA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 34.0 4.17e-01 83.8% 98.9%
2mklC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 32.0 3.74e-01 77.7% 83.8%
4rd7A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 34.0 3.76e-01 83.1% 79.0%
4g59C01 2.60.40.2920 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 34.0 3.86e-01 81.1% 90.3%
5dawA00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.52 41.0 3.37e-01 85.1% 86.8%
2je8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 34.0 3.85e-01 78.4% 89.1%
2cc6A00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.52 24.0 3.40e-01 71.6% 98.4%
4mv2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 32.0 3.52e-01 82.4% 77.5%
3nkgA00 2.60.120.790 Mainly Beta › Sandwich › Jelly Rolls › 0.50 39.0 3.78e-01 83.8% 90.0%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3837954 1.1.7.87 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.65 42.0 5.03e-01 72.3% 100.0%
3602447 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.64 40.0 3.88e-01 81.8% 54.1%
4258556 11.1.1.66 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MdoG 0.64 38.0 4.48e-01 77.0% 86.0%
3969813 1.1.7.79 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND 0.64 44.0 5.14e-01 74.3% 100.0%
5051358 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 38.0 4.46e-01 81.8% 84.8%
4956610 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.63 44.0 4.06e-01 83.1% 56.8%
3250947 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 40.0 4.48e-01 75.0% 82.6%
5074893 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 32.0 3.98e-01 75.7% 80.0%
3968971 1.1.7.87 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.62 38.0 4.70e-01 70.9% 100.0%
5054542 4081.1.1.12 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF2207 0.62 41.0 3.90e-01 84.5% 56.5%
5031981 4081.1.1.7 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I 0.62 41.0 3.86e-01 83.8% 54.9%
3271205 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 32.0 3.85e-01 84.5% 73.0%
5045644 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.62 41.0 3.99e-01 83.8% 58.8%
3969381 872.1.1.0 ↗ a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like 0.60 27.0 3.83e-01 72.3% 88.6%
3572503 11.1.1.297 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.60 41.0 4.18e-01 83.1% 70.3%
1885 11.1.5.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Cohesin 0.60 39.0 4.09e-01 81.8% 70.4%
4385554 11.1.5.28 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF1775 0.60 37.0 3.91e-01 81.1% 68.5%
5038746 872.1.1.2 ↗ a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin 0.60 27.0 3.77e-01 72.3% 88.6%
3027089 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 31.0 3.94e-01 76.4% 85.1%
4601955 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.59 35.0 4.14e-01 78.4% 87.4%
5035593 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 37.0 4.28e-01 79.1% 88.6%
3578304 11.1.1.297 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.59 40.0 4.14e-01 83.1% 72.9%
3889792 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.58 32.0 2.87e-01 80.4% 38.4%
3396112 10.32.1.235 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MBF2 0.57 37.0 4.29e-01 95.3% 95.0%
3238615 11.1.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.57 36.0 4.05e-01 73.6% 83.6%
4956761 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 37.0 3.68e-01 82.4% 61.9%
3253620 11.1.1.801 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 0.56 36.0 3.77e-01 77.7% 69.6%
3903732 11.1.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.56 28.0 3.64e-01 81.8% 87.3%
5007335 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 35.0 3.44e-01 82.4% 55.2%
3491160 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 41.0 4.15e-01 82.4% 75.3%
5059640 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.55 36.0 3.85e-01 79.7% 75.4%
4998046 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.55 34.0 3.61e-01 82.4% 68.1%
3389051 1.1.7.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.54 40.0 4.03e-01 77.0% 82.0%
3988580 1.1.7.95 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25990 0.54 39.0 4.37e-01 75.0% 100.0%
4094675 812.1.1.1 ↗ a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.54 31.0 3.90e-01 81.1% 98.8%
3267244 12.3.1.46 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD 0.53 44.0 3.74e-01 90.5% 81.2%
3611768 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 33.0 3.61e-01 83.1% 74.4%
4932769 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 35.0 3.87e-01 83.8% 82.5%
3274460 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 33.0 3.42e-01 77.7% 67.4%
3472421 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.52 40.0 4.25e-01 85.8% 92.3%
1588 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.52 34.0 3.83e-01 78.4% 88.3%
3940034 11.1.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Zona_pellucida 0.52 36.0 3.83e-01 71.6% 100.0%
3214116 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 35.0 3.84e-01 73.0% 85.8%
3542615 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.51 30.0 3.55e-01 77.7% 86.3%
4019790 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 34.0 3.71e-01 79.1% 81.7%
3486945 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.51 40.0 4.22e-01 85.8% 93.1%
4673207 256.1.1.10 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › MinE 0.50 30.0 3.72e-01 80.4% 100.0%
D2 high residues 295-419
PDB
Domain cluster: rep: GP72__YP_007417837__Caviid_betaherpesvirus_2__33706__D239-337
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF06284.17 best Cytomega_UL84 39.9 2.90e-10 92.0% 14.0%
PF06501.16 Herpes_U55 22.7 5.60e-05 85.6% 16.4%
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h6xB00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.86 63.0 6.28e-01 76.0% 86.2%
2d4lA01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.85 60.0 6.51e-01 72.8% 94.3%
2bsyA02 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.84 59.0 6.55e-01 72.0% 95.1%
3km3B00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.81 57.0 5.27e-01 72.0% 85.9%
3ecyA00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.81 59.0 6.11e-01 75.2% 80.7%
2r9qC01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.78 57.0 5.19e-01 75.2% 84.7%
4xjcF00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.78 60.0 5.34e-01 79.2% 78.7%
1xs1A00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.77 59.0 5.03e-01 79.2% 81.3%
1pkhB00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.77 57.0 5.10e-01 77.6% 88.0%
2r9qA02 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.76 56.0 5.08e-01 76.0% 89.0%
1dunA00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.74 61.0 6.25e-01 92.8% 90.0%
1sixA00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.71 62.0 5.76e-01 92.8% 83.0%
1euwA00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.69 60.0 5.82e-01 92.8% 86.0%
2bsyA01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.68 56.0 5.27e-01 86.4% 76.2%
2oznA00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 45.0 4.48e-01 72.0% 66.9%
5x7qA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 43.0 4.35e-01 72.0% 89.8%
2l8aA00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.61 43.0 4.11e-01 73.6% 69.8%
4il7A00 2.60.120.1300 Mainly Beta › Sandwich › Jelly Rolls › 0.60 35.0 4.12e-01 72.0% 83.5%
2cwrA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 35.0 3.90e-01 71.2% 73.2%
1yllA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 31.0 3.48e-01 71.2% 65.2%
2w47A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 45.0 4.47e-01 83.2% 94.8%
4i0wD02 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.58 41.0 4.07e-01 72.8% 81.5%
3vmnA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 40.0 4.21e-01 72.0% 84.7%
4dzgA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.56 39.0 4.11e-01 71.2% 93.8%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 38.0 4.36e-01 72.0% 97.7%
1hkfA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 38.0 4.08e-01 71.2% 86.1%
3h7jA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 42.0 4.47e-01 84.8% 91.8%
2vvfA01 2.60.120.730 Mainly Beta › Sandwich › Jelly Rolls › 0.55 39.0 3.77e-01 72.8% 99.3%
4indA03 2.60.120.1330 Mainly Beta › Sandwich › Jelly Rolls › 0.55 38.0 3.96e-01 72.0% 96.6%
3bb6C00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 34.0 3.58e-01 72.0% 67.9%
2vpvA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 38.0 4.24e-01 72.8% 94.7%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.54 37.0 4.05e-01 72.0% 85.6%
3bn6A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 38.0 3.54e-01 72.0% 82.3%
3f8uB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 38.0 3.81e-01 71.2% 88.9%
1v70A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 36.0 3.93e-01 72.0% 81.9%
1y9qA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 38.0 4.27e-01 73.6% 97.8%
2i45D00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 35.0 3.92e-01 72.0% 83.8%
1o4tA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 37.0 3.90e-01 72.8% 80.9%
5fq0A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 36.0 3.79e-01 72.0% 78.2%
5j7mA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 38.0 3.90e-01 75.2% 79.5%
3cewA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 38.0 4.00e-01 74.4% 84.5%
2wkkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 37.0 3.50e-01 72.0% 84.7%
1sefA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 42.0 4.28e-01 85.6% 95.0%
3h7jA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 35.0 3.70e-01 72.0% 75.4%
7zvmA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 37.0 4.05e-01 72.8% 89.2%
3h8uA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 36.0 3.63e-01 72.0% 71.3%
2pfwA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 34.0 3.64e-01 72.0% 75.7%
2gu9A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 35.0 3.75e-01 70.4% 82.5%
3bu7A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 46.0 3.38e-01 100.0% 75.8%
3rnsA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 34.0 3.73e-01 71.2% 83.0%
2vecA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 36.0 3.90e-01 72.0% 89.3%
2zgoA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 36.0 3.31e-01 72.0% 82.0%
4mv2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 37.0 3.76e-01 73.6% 76.7%
3ap9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 36.0 3.39e-01 71.2% 86.1%
2pttB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.81e-01 72.0% 85.2%
4e2gC00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 34.0 3.41e-01 71.2% 66.7%
2qqkA02 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.51 36.0 3.79e-01 74.4% 93.9%
1sfnA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 45.0 3.62e-01 98.4% 54.7%
1ju3A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 43.0 3.66e-01 96.0% 83.9%
4rd7A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 36.0 3.69e-01 73.6% 77.3%
1y3tA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 35.0 3.26e-01 72.0% 56.2%
1vj2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 35.0 3.69e-01 72.8% 78.9%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
162469 70.2.1.1 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.83 62.0 6.46e-01 76.8% 92.1%
4269280 70.2.1.5 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.77 59.0 5.23e-01 79.2% 80.6%
5073212 70.2.1.5 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.77 59.0 5.29e-01 79.2% 82.4%
1247195 70.2.1.1 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › dUTPase 0.75 67.0 6.52e-01 100.0% 86.8%
1247252 70.2.1.4 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD_C 0.75 56.0 4.97e-01 77.6% 87.0%
3705260 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 45.0 5.17e-01 71.2% 90.0%
5048013 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 40.0 4.50e-01 72.0% 83.2%
4955989 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 40.0 4.41e-01 71.2% 83.2%
5041113 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 39.0 4.43e-01 71.2% 87.8%
5005659 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.61 46.0 4.64e-01 79.2% 80.8%
4475065 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.60 39.0 4.15e-01 72.0% 76.2%
3924594 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.60 37.0 4.16e-01 72.0% 81.1%
3241013 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 37.0 3.98e-01 71.2% 71.3%
4990610 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 37.0 4.13e-01 72.0% 78.6%
5028186 10.1.2.183 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.60 41.0 4.41e-01 70.4% 96.2%
3526370 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.59 41.0 4.21e-01 72.0% 97.5%
2418779 10.2.1.60 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › STIV_penton_2nd 0.59 34.0 3.92e-01 71.2% 79.5%
4014484 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 41.0 4.47e-01 72.0% 99.0%
3731894 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 40.0 4.43e-01 71.2% 100.0%
5046609 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 40.0 4.36e-01 72.0% 96.2%
3566761 10.32.1.230 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N 0.58 40.0 4.32e-01 71.2% 91.4%
4028847 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.58 36.0 3.94e-01 71.2% 77.0%
3236306 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 42.0 4.09e-01 76.8% 69.6%
3489033 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.57 36.0 3.48e-01 71.2% 53.1%
4945478 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 41.0 4.02e-01 75.2% 67.9%
5050377 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 40.0 4.21e-01 71.2% 86.4%
5039382 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 35.0 4.06e-01 72.0% 89.4%
4263830 11.1.5.85 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C 0.57 40.0 3.59e-01 72.8% 69.9%
3933402 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.57 39.0 4.09e-01 71.2% 94.8%
3342352 10.32.1.210 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C 0.57 39.0 4.17e-01 72.0% 99.1%
3919527 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 38.0 4.16e-01 70.4% 91.4%
3480786 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.56 39.0 3.61e-01 72.0% 61.9%
3597620 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 38.0 3.64e-01 71.2% 68.7%
5053773 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 38.0 3.89e-01 72.0% 73.3%
3195183 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.55 37.0 3.92e-01 71.2% 78.2%
134743 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.55 37.0 3.93e-01 72.0% 77.2%
3725115 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.54 36.0 3.37e-01 72.0% 53.5%
3838063 10.12.1.98 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer 0.54 37.0 3.74e-01 72.8% 69.6%
4949707 10.12.1.98 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer 0.54 37.0 3.28e-01 72.8% 48.9%
1303 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.54 36.0 3.93e-01 72.0% 81.9%
3971446 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.54 37.0 3.85e-01 72.8% 76.5%
4357938 10.12.1.154 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer, ManC_GMP_beta-helix 0.54 37.0 3.30e-01 72.8% 50.3%
4174964 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.53 37.0 3.23e-01 72.8% 47.6%
3973758 10.12.1.98 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer 0.53 37.0 3.86e-01 72.8% 77.2%
3973004 208.4.1.0 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain › Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain 0.53 36.0 3.11e-01 71.2% 44.0%
1876221 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.53 36.0 3.79e-01 72.0% 78.2%
3413879 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.53 37.0 3.97e-01 72.0% 92.4%
167437 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.53 38.0 3.91e-01 74.4% 79.5%
5009241 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.52 36.0 3.90e-01 70.4% 88.0%
4978598 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.52 36.0 3.96e-01 71.2% 95.0%
4995691 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.52 37.0 4.08e-01 94.4% 93.0%
4988382 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.51 35.0 3.66e-01 72.0% 76.1%
5026683 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.51 36.0 3.72e-01 72.8% 75.8%
1030916 10.12.1.8 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding 0.51 36.0 3.86e-01 72.0% 92.3%
3973477 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.51 35.0 3.69e-01 72.0% 78.1%
1877808 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.51 35.0 3.90e-01 71.2% 90.8%
3691562 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.50 30.0 2.97e-01 73.6% 52.1%
1279906 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.50 35.0 3.36e-01 72.0% 62.5%
D3 medium residues 49-132
PDB