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GQ334450.1__ACT65686.1__X__00124
Bact-VirGQ334450.1__ACT65686.1__X__00124
Identity
- Accession:
- GQ334450 ↗
- Kingdom:
- phage
Quality
75.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-61
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wjpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.58 | 31.0 | 3.87e-01 | 72.1% | 100.0% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 40.0 | 3.97e-01 | 75.4% | 69.7% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3859342 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.67 | 44.0 | 4.49e-01 | 80.3% | 68.3% |
| 3796618 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.66 | 45.0 | 4.16e-01 | 72.1% | 71.2% |
| 3489926 | 377.12.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › RPL34 › RPL34 › Ribosomal_L34e | 0.62 | 44.0 | 3.50e-01 | 75.4% | 45.6% |
| 4366072 | 377.12.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › RPL34 › RPL34 › Ribosomal_L34e | 0.61 | 45.0 | 3.73e-01 | 77.0% | 55.2% |
| 3873722 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 41.0 | 3.62e-01 | 77.0% | 83.2% |
| 3777921 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 43.0 | 2.63e-01 | 90.2% | 25.3% |
| 3241558 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.52 | 36.0 | 3.57e-01 | 73.8% | 84.6% |
D2
high
residues 67-150
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2q18X01 | 3.10.330.40 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.64 | 42.0 | 4.58e-01 | 96.4% | 81.4% |
| 2r2aA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 43.0 | 3.35e-01 | 83.3% | 92.1% |
| 5oyhD00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.52 | 39.0 | 3.11e-01 | 81.0% | 88.1% |
| 3nvqA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 42.0 | 2.71e-01 | 94.0% | 54.6% |
| 3ec3A02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 38.0 | 3.42e-01 | 81.0% | 84.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4426056 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.60 | 44.0 | 3.68e-01 | 78.6% | 88.4% |
| 5041229 | 375.13.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain | 0.59 | 34.0 | 3.92e-01 | 90.5% | 78.3% |
| 3654790 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 34.0 | 3.90e-01 | 75.0% | 85.0% |
| 5041236 | 375.13.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt | 0.53 | 30.0 | 3.47e-01 | 83.3% | 81.8% |
| 4191066 | 2005.1.1.15 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase | 0.52 | 43.0 | 3.23e-01 | 94.0% | 75.5% |
| 3072707 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.51 | 42.0 | 2.69e-01 | 94.0% | 71.2% |
| 3600658 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 39.0 | 2.59e-01 | 82.1% | 37.4% |