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GQ334450.1__ACT65686.1__X__00124

Bact-Vir

GQ334450.1__ACT65686.1__X__00124

Identity

Accession:
GQ334450 ↗
Kingdom:
phage

Quality

75.3 mean pLDDT

Taxonomy

TaxID: 658401

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-61
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wjpA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.58 31.0 3.87e-01 72.1% 100.0%
2vp7A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.57 40.0 3.97e-01 75.4% 69.7%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3859342 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.67 44.0 4.49e-01 80.3% 68.3%
3796618 377.1.1.5 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.66 45.0 4.16e-01 72.1% 71.2%
3489926 377.12.1.1 few secondary structure elements › Glucocorticoid receptor-like › RPL34 › RPL34 › Ribosomal_L34e 0.62 44.0 3.50e-01 75.4% 45.6%
4366072 377.12.1.1 few secondary structure elements › Glucocorticoid receptor-like › RPL34 › RPL34 › Ribosomal_L34e 0.61 45.0 3.73e-01 77.0% 55.2%
3873722 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.58 41.0 3.62e-01 77.0% 83.2%
3777921 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 43.0 2.63e-01 90.2% 25.3%
3241558 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.52 36.0 3.57e-01 73.8% 84.6%
D2 high residues 67-150
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2q18X01 3.10.330.40 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.64 42.0 4.58e-01 96.4% 81.4%
2r2aA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 43.0 3.35e-01 83.3% 92.1%
5oyhD00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.52 39.0 3.11e-01 81.0% 88.1%
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 42.0 2.71e-01 94.0% 54.6%
3ec3A02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 38.0 3.42e-01 81.0% 84.9%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4426056 227.1.1.4 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.60 44.0 3.68e-01 78.6% 88.4%
5041229 375.13.1.0 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain 0.59 34.0 3.92e-01 90.5% 78.3%
3654790 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 34.0 3.90e-01 75.0% 85.0%
5041236 375.13.1.1 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt 0.53 30.0 3.47e-01 83.3% 81.8%
4191066 2005.1.1.15 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase 0.52 43.0 3.23e-01 94.0% 75.5%
3072707 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.51 42.0 2.69e-01 94.0% 71.2%
3600658 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 39.0 2.59e-01 82.1% 37.4%