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GQ357915.1__ACV50043.1__X__00020

Bact-Vir

GQ357915.1__ACV50043.1__X__00020

Identity

Accession:
GQ357915 ↗
Kingdom:
phage

Quality

76.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ionavirus› Delftia_phage_PhiW-14

TaxID: 665032

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-68
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16805.12 best Trans_coact 66.0 2.90e-18 100.0% 80.8%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3tbiA00 1.10.10.2850 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phage late-transcription coactivator-like 0.82 71.0 6.75e-01 98.4% 83.1%
1vrmA02 1.10.3980.10 Mainly Alpha › Orthogonal Bundle › T-fold › ApbE-like superfamily 0.72 41.0 3.42e-01 93.4% 33.7%
1uyvB02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.70 48.0 3.02e-01 70.5% 15.5%
7dklA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 46.0 4.05e-01 73.8% 62.2%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 36.0 3.10e-01 72.1% 35.7%
3qdnA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 46.0 4.22e-01 93.4% 59.5%
3l9vC00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 43.0 3.11e-01 75.4% 32.6%
4nxiA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 42.0 3.05e-01 77.0% 27.5%
3a1yA00 1.10.10.1410 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.60 42.0 4.28e-01 83.6% 81.0%
3bh1A02 1.20.1570.10 Mainly Alpha › Up-down Bundle › dip2346 fold › dip2346 domain like 0.59 40.0 3.40e-01 78.7% 42.6%
5jc3A02 1.20.1320.30 Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › 0.59 50.0 4.04e-01 100.0% 59.5%
3vtxB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 51.0 3.68e-01 100.0% 45.4%
2ou3A01 1.10.3680.10 Mainly Alpha › Orthogonal Bundle › TerB-like › TerB-like 0.58 45.0 3.42e-01 90.2% 34.4%
2yx8A00 1.10.150.510 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family 0.58 49.0 4.57e-01 100.0% 95.1%
2ga8A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 49.0 3.09e-01 98.4% 71.4%
2lrdA00 1.10.10.1840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.55 38.0 3.86e-01 86.9% 75.4%
7ep3A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.55 47.0 3.20e-01 98.4% 39.7%
3hz6A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 42.0 2.91e-01 88.5% 65.6%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.54 46.0 4.40e-01 100.0% 98.7%
4l3uA00 1.20.1480.40 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 0.54 45.0 3.70e-01 100.0% 48.0%
4muoA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.52 43.0 4.08e-01 100.0% 77.8%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5022566 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 55.0 5.79e-01 83.6% 81.8%
4080866 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 47.0 4.97e-01 78.7% 72.7%
3364039 2007.2.3.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc 0.71 56.0 4.06e-01 95.1% 30.3%
4932241 2007.1.2.56 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF116 0.65 57.0 4.08e-01 98.4% 83.9%
4391470 101.1.2.240 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF2695 0.65 50.0 4.50e-01 85.2% 61.8%
4114206 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.64 43.0 4.75e-01 80.3% 93.3%
4995680 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.63 50.0 5.06e-01 88.5% 91.7%
4854430 2485.1.1.9 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › 2Fe-2S_thioredx 0.63 48.0 4.21e-01 93.4% 54.7%
3236141 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.59 42.0 3.30e-01 75.4% 88.9%
3806413 4133.1.1.0 ↗ alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like 0.56 48.0 3.62e-01 98.4% 60.6%
4993084 3843.1.1.0 ↗ alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.54 45.0 4.34e-01 93.4% 92.9%
3283311 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 37.0 3.18e-01 72.1% 81.1%
4098259 110.1.1.13 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DUF3603 0.51 35.0 2.95e-01 70.5% 65.3%
3362789 4133.1.1.2 ↗ alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Tic110 0.50 41.0 3.61e-01 100.0% 60.0%