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GQ357915.1__ACV50071.1__X__00048
Bact-VirGQ357915.1__ACV50071.1__X__00048
Identity
- Accession:
- GQ357915 ↗
- Kingdom:
- phage
Quality
74.1
mean pLDDT
Taxonomy
TaxID: 665032
Cluster
View cluster (33 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-204
Domain cluster:
rep: ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00352__D40-229
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16724.12 best | T4-gp15_tss | 157.3 | 5.60e-46 | 100.0% | 76.4% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.81 | 71.0 | 6.84e-01 | 98.9% | 82.4% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.80 | 54.0 | 6.54e-01 | 96.3% | 100.0% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.79 | 55.0 | 6.45e-01 | 99.5% | 97.8% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.79 | 49.0 | 6.09e-01 | 97.4% | 97.5% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.76 | 50.0 | 6.04e-01 | 96.3% | 98.4% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.70 | 37.0 | 4.95e-01 | 95.8% | 97.0% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.69 | 38.0 | 4.82e-01 | 97.4% | 90.3% |
| 4binA01 | 2.60.40.3500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 30.0 | 3.75e-01 | 93.2% | 64.7% |
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 30.0 | 3.86e-01 | 83.2% | 76.6% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.57 | 39.0 | 4.48e-01 | 96.3% | 94.2% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 27.0 | 3.59e-01 | 87.9% | 84.4% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.52 | 42.0 | 3.38e-01 | 83.7% | 78.4% |
| 3qkbA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.52 | 26.0 | 3.66e-01 | 95.3% | 97.9% |
| 3zxoA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 33.0 | 3.96e-01 | 95.8% | 99.2% |
| 2qyxA02 | 3.30.70.1360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › mj0159-like | 0.51 | 30.0 | 3.86e-01 | 91.1% | 100.0% |
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.50 | 17.0 | 2.77e-01 | 93.2% | 78.7% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4888780 | 304.124.1.5 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › T4-gp15_tss | 0.85 | 82.0 | 7.57e-01 | 100.0% | 83.8% |
| 5004177 | 304.124.1.3 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF3168 | 0.83 | 54.0 | 6.64e-01 | 96.3% | 100.0% |
| 5454 | 304.124.1.2 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Gp37 | 0.80 | 55.0 | 6.51e-01 | 99.5% | 99.3% |
| 5012467 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.79 | 32.0 | 4.26e-01 | 94.2% | 66.4% |
| 4034595 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.79 | 50.0 | 6.18e-01 | 95.8% | 100.0% |
| 5040945 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.77 | 58.0 | 6.51e-01 | 98.9% | 98.0% |
| 3964886 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.77 | 55.0 | 6.41e-01 | 95.3% | 99.3% |
| 3970985 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.77 | 55.0 | 6.39e-01 | 97.4% | 100.0% |
| 3589225 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.74 | 52.0 | 6.09e-01 | 97.4% | 100.0% |
| 3585212 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.73 | 70.0 | 6.66e-01 | 99.5% | 94.4% |
| 197096 | 310.3.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PilO | 0.72 | 38.0 | 4.54e-01 | 96.8% | 72.6% |
| 3164985 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.72 | 33.0 | 3.63e-01 | 95.3% | 50.6% |
| 3606930 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.71 | 41.0 | 5.25e-01 | 96.3% | 98.2% |
| 3839261 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.70 | 35.0 | 4.29e-01 | 94.2% | 73.9% |
| None | — | 0.70 | 36.0 | 4.82e-01 | 94.7% | 94.0% | |
| 4276918 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.61 | 33.0 | 3.98e-01 | 88.4% | 78.4% |
| 4996025 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.60 | 30.0 | 3.83e-01 | 91.1% | 81.9% |
| 3603483 | 3513.1.1.0 ↗ | a+b two layers › Putative lipoprotein LppA › Putative lipoprotein LppA › Putative lipoprotein LppA | 0.60 | 36.0 | 4.36e-01 | 95.8% | 89.6% |
| 1444177 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 38.0 | 4.47e-01 | 95.3% | 93.4% |
| 4888732 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.58 | 39.0 | 4.24e-01 | 96.3% | 82.1% |
| 4974181 | 331.3.1.74 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PF27226 | 0.57 | 31.0 | 4.17e-01 | 92.1% | 100.0% |
| 4034209 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.55 | 38.0 | 4.44e-01 | 95.3% | 99.3% |
| 3695532 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.55 | 29.0 | 3.46e-01 | 82.1% | 75.2% |
| 3993144 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.54 | 36.0 | 3.93e-01 | 95.8% | 79.4% |
| 3576789 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.54 | 41.0 | 4.16e-01 | 95.3% | 80.5% |
| 3995523 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.53 | 30.0 | 3.14e-01 | 94.2% | 58.2% |
| 3290484 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.52 | 32.0 | 3.38e-01 | 77.9% | 65.7% |
| 5027492 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.52 | 32.0 | 3.73e-01 | 90.5% | 84.3% |
| 3529818 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.51 | 38.0 | 4.26e-01 | 97.9% | 98.7% |