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GQ357915.1__ACV50072.1__X__00049

Bact-Vir

GQ357915.1__ACV50072.1__X__00049

Identity

Accession:
GQ357915 ↗
Kingdom:
phage

Quality

74.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ionavirus› Delftia_phage_PhiW-14

TaxID: 665032

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-170
PDB
Domain cluster: rep: NC_041949.1__YP_009603211.1__FDH66_gp75__00023__D24-141
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11649.13 best T4_neck-protein 53.9 2.50e-14 97.8% 42.1%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5lpeB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 39.0 4.70e-01 90.5% 78.5%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.67 43.0 4.52e-01 92.0% 71.8%
1a7sA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 39.0 4.40e-01 89.8% 76.2%
3h7tA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 38.0 4.23e-01 90.5% 72.1%
2f91A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 41.0 4.46e-01 90.5% 81.4%
2xrcC04 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 32.0 2.98e-01 92.7% 39.9%
4jbmB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 28.0 3.27e-01 100.0% 71.9%
2olgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 38.0 4.09e-01 91.2% 88.7%
2k4qA00 4.10.410.40 Few Secondary Structures › Irregular › Factor Xa Inhibitor › 0.52 43.0 4.14e-01 89.1% 84.6%
2qckA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 42.0 4.13e-01 91.2% 79.5%
1inyA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 36.0 2.58e-01 70.8% 87.1%
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.51 43.0 4.32e-01 92.0% 90.5%
3jr1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 27.0 3.08e-01 89.8% 68.7%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3942928 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.70 41.0 5.14e-01 91.2% 92.9%
4237287 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.70 45.0 4.77e-01 91.2% 73.3%
4287081 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.69 45.0 4.69e-01 91.2% 71.2%
5003311 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.69 53.0 5.91e-01 90.5% 98.2%
4952429 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 45.0 5.17e-01 91.2% 98.0%
4988096 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.60 48.0 5.26e-01 91.2% 99.1%
3587815 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.60 44.0 4.97e-01 95.6% 98.1%
5040464 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 40.0 4.82e-01 79.6% 98.9%
4970796 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 42.0 4.94e-01 78.1% 100.0%
4981269 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 40.0 4.83e-01 78.8% 100.0%
5062289 1.1.7.28 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.57 38.0 4.61e-01 78.8% 98.9%
4062509 1.1.7.91 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.57 41.0 4.69e-01 80.3% 97.1%
4260208 1.1.13.62 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 0.57 42.0 4.82e-01 87.6% 100.0%
4118093 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.57 46.0 4.44e-01 91.2% 75.5%
3164699 1.1.13.33 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N 0.57 45.0 4.81e-01 92.7% 99.1%
3602499 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.56 44.0 4.57e-01 92.0% 87.7%
2642579 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.55 45.0 4.62e-01 92.0% 91.5%
4273561 1.1.7.91 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.55 42.0 4.31e-01 80.3% 83.0%
4372074 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.53 39.0 3.96e-01 79.6% 75.0%
5027270 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.53 46.0 4.17e-01 91.2% 73.1%
3574420 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 31.0 3.03e-01 70.1% 50.0%
3973282 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.52 40.0 4.45e-01 80.3% 100.0%
3973696 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 39.0 4.14e-01 81.0% 85.6%
5040331 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.52 47.0 4.67e-01 100.0% 99.3%
3171972 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.52 45.0 4.11e-01 91.2% 81.5%
5053266 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.52 44.0 4.17e-01 91.2% 87.5%
4888732 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.51 43.0 4.11e-01 92.0% 79.5%