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GQ357915.1__ACV50130.1__X__00107
Bact-VirGQ357915.1__ACV50130.1__X__00107
Identity
- Accession:
- GQ357915 ↗
- Kingdom:
- phage
Quality
90.1
mean pLDDT
Taxonomy
TaxID: 665032
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-88
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.63 | 48.0 | 4.54e-01 | 87.0% | 69.1% |
| 1kfdA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.60 | 46.0 | 4.22e-01 | 98.1% | 63.4% |
| 6feaB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.59 | 44.0 | 3.28e-01 | 81.5% | 35.6% |
| 3ne5B04 | 6.10.140.730 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 41.0 | 4.18e-01 | 74.1% | 100.0% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.58 | 49.0 | 4.52e-01 | 96.3% | 80.0% |
| 1iq0A03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.56 | 48.0 | 3.72e-01 | 94.4% | 44.0% |
| 2a2cA03 | 1.20.1440.340 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.56 | 47.0 | 3.50e-01 | 94.4% | 68.8% |
| 4c0zA02 | 1.10.150.480 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.56 | 45.0 | 3.81e-01 | 92.6% | 86.5% |
| 2jx4A01 | 6.10.140.460 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 42.0 | 4.36e-01 | 88.9% | 97.9% |
| 1e52A00 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.54 | 39.0 | 3.89e-01 | 98.1% | 76.8% |
| 2aj4B03 | 1.20.1440.340 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.54 | 46.0 | 3.29e-01 | 96.3% | 59.9% |
| 2cmpA00 | 1.10.10.1400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Terminase, small subunit, N-terminal DNA-binding domain, HTH motif | 0.53 | 41.0 | 4.08e-01 | 85.2% | 87.5% |
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 36.0 | 3.69e-01 | 79.6% | 78.4% |
| 1bhaA00 | 1.10.287.170 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 44.0 | 4.21e-01 | 100.0% | 95.5% |
| 1sq5C00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 44.0 | 2.82e-01 | 100.0% | 52.0% |
| 2oezA02 | 1.10.3900.10 | Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like | 0.51 | 41.0 | 3.09e-01 | 100.0% | 95.7% |
| 1kyoF00 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.51 | 41.0 | 3.80e-01 | 94.4% | 79.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4079293 | 4946.1.1.1 ↗ | alpha bundles › helical domain in YacF-like proteins › helical domain in YacF-like proteins › helical domain in YacF-like proteins › ZapD | 0.64 | 51.0 | 3.75e-01 | 96.3% | 100.0% |
| 3958970 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.63 | 49.0 | 4.41e-01 | 90.7% | 67.5% |
| 3623074 | 4177.2.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › Inhibitor of kappaB kinase beta dimerization domain › Inhibitor of kappaB kinase beta dimerization domain | 0.61 | 53.0 | 3.34e-01 | 100.0% | 68.0% |
| 3804219 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.60 | 42.0 | 3.64e-01 | 81.5% | 44.4% |
| 5001154 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.59 | 43.0 | 3.08e-01 | 81.5% | 43.3% |
| 4990841 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.58 | 51.0 | 2.93e-01 | 100.0% | 10.9% |
| 4289138 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.58 | 45.0 | 2.88e-01 | 85.2% | 18.5% |
| 4532422 | 4946.1.1.1 ↗ | alpha bundles › helical domain in YacF-like proteins › helical domain in YacF-like proteins › helical domain in YacF-like proteins › ZapD | 0.54 | 43.0 | 3.19e-01 | 96.3% | 95.8% |