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GQ357915.1__ACV50133.1__X__00110

Bact-Vir

GQ357915.1__ACV50133.1__X__00110

Identity

Accession:
GQ357915 ↗
Kingdom:
phage

Quality

67.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ionavirus› Delftia_phage_PhiW-14

TaxID: 665032

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-91
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rl1A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 61.0 5.40e-01 100.0% 73.9%
1jofA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 55.0 3.39e-01 90.2% 17.0%
4rzkA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 58.0 5.27e-01 100.0% 77.0%
1s4uX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 53.0 3.35e-01 90.2% 18.8%
5m8cB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 52.0 3.26e-01 90.2% 15.8%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 53.0 3.36e-01 91.8% 17.3%
1wgvA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 56.0 4.54e-01 100.0% 55.6%
4a2lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 48.0 3.10e-01 86.9% 16.5%
2cg9X01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 53.0 4.67e-01 100.0% 63.0%
2b5nB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 51.0 3.27e-01 91.8% 18.4%
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 53.0 3.22e-01 100.0% 92.6%
4ci8A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 53.0 3.36e-01 100.0% 56.0%
4iwxA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.60 40.0 3.33e-01 70.5% 78.4%
1fbnA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 31.0 3.32e-01 100.0% 54.9%
2k8qA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 50.0 4.01e-01 100.0% 50.7%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.59 50.0 3.06e-01 98.4% 89.5%
3q9oA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 44.0 3.11e-01 85.2% 31.0%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.58 47.0 3.76e-01 90.2% 77.4%
4qhzA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.57 43.0 3.04e-01 86.9% 47.7%
1kmdA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 40.0 3.35e-01 78.7% 67.5%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 47.0 3.21e-01 100.0% 34.9%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.55 39.0 3.07e-01 77.0% 44.1%
1vw4F02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.55 41.0 3.71e-01 100.0% 56.5%
4z85A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 41.0 2.86e-01 80.3% 74.1%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 46.0 3.09e-01 100.0% 31.2%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.54 43.0 3.68e-01 90.2% 97.1%
3fbqA02 2.60.40.1640 Mainly Beta › Sandwich › Immunoglobulin-like › Conserved domain protein. 0.52 43.0 3.28e-01 100.0% 39.6%
7yj5A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 45.0 3.41e-01 100.0% 96.1%
2dmwA01 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.52 37.0 3.16e-01 80.3% 94.8%
2opjA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 38.0 3.47e-01 80.3% 88.4%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.51 38.0 3.09e-01 93.4% 40.5%
1u0mA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 45.0 3.42e-01 100.0% 92.5%
4csqA00 2.30.29.190 Mainly Beta › Roll › PH-domain like › 0.51 42.0 3.51e-01 95.1% 88.5%
4fo0A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 43.0 3.22e-01 98.4% 80.7%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.69e-01 93.4% 81.8%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 36.0 3.68e-01 85.2% 78.7%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3633309 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.73 60.0 3.58e-01 90.2% 19.3%
4927889 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.72 62.0 5.86e-01 100.0% 85.3%
3487523 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.70 60.0 5.25e-01 100.0% 69.5%
5052436 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.70 61.0 5.63e-01 100.0% 86.3%
5047859 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.70 60.0 5.80e-01 100.0% 87.1%
5056676 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.68 59.0 5.09e-01 100.0% 64.0%
5002276 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.68 58.0 5.53e-01 100.0% 85.3%
4947901 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.68 58.0 5.15e-01 100.0% 69.9%
4982583 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.68 59.0 4.39e-01 100.0% 40.6%
5040124 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.68 58.0 5.08e-01 100.0% 68.4%
5031161 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.68 58.0 4.35e-01 100.0% 40.6%
5074343 319.1.1.23 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 0.68 58.0 5.47e-01 100.0% 86.7%
4980371 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.67 58.0 5.20e-01 100.0% 73.9%
4930399 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.67 58.0 4.30e-01 100.0% 39.4%
2455597 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 53.0 3.32e-01 90.2% 15.2%
4538358 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.67 58.0 4.78e-01 100.0% 55.7%
4960987 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.67 58.0 4.41e-01 100.0% 43.3%
4943092 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.67 58.0 4.55e-01 100.0% 47.4%
5011151 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.67 58.0 4.33e-01 100.0% 41.9%
4985279 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.67 56.0 5.27e-01 100.0% 81.2%
5031493 319.1.1.23 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 0.67 57.0 5.32e-01 100.0% 83.3%
5035122 319.1.1.23 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 0.67 57.0 4.33e-01 100.0% 41.9%
5005241 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.67 57.0 5.13e-01 100.0% 73.9%
4946267 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.66 57.0 5.08e-01 100.0% 72.2%
3743718 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.66 58.0 4.31e-01 100.0% 40.6%
4962615 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.66 56.0 4.97e-01 100.0% 68.4%
5056769 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.66 57.0 5.09e-01 100.0% 75.3%
3907054 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.66 57.0 4.90e-01 100.0% 70.0%
4928475 319.1.1.5 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS 0.66 57.0 4.70e-01 100.0% 57.0%
4947251 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.66 56.0 4.69e-01 100.0% 56.5%
4967968 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.66 56.0 4.81e-01 100.0% 62.9%
5004113 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.66 56.0 5.32e-01 100.0% 86.7%
4974098 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.66 56.0 5.04e-01 100.0% 72.2%
5056216 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.66 56.0 4.60e-01 100.0% 54.2%
5051740 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.66 56.0 4.94e-01 100.0% 69.1%
4935941 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.66 56.0 5.08e-01 100.0% 74.1%
4951974 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.65 55.0 4.89e-01 100.0% 68.4%
3500367 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.65 56.0 5.03e-01 100.0% 68.9%
4974151 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.65 55.0 4.96e-01 100.0% 72.2%
4928787 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.65 55.0 5.12e-01 100.0% 87.5%
4974152 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.65 55.0 4.89e-01 100.0% 69.9%
3905550 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.65 55.0 4.64e-01 100.0% 57.3%
3396193 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.65 55.0 4.44e-01 100.0% 50.0%
3855803 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.64 54.0 4.60e-01 100.0% 58.2%
5020903 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.64 55.0 4.91e-01 100.0% 71.1%
4939095 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.64 54.0 5.12e-01 100.0% 85.3%
3399963 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.64 55.0 4.50e-01 100.0% 51.7%
3795449 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.64 54.0 4.54e-01 100.0% 59.1%
4028412 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.64 54.0 4.57e-01 100.0% 56.4%
5001498 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.64 54.0 4.44e-01 100.0% 53.3%
5005273 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.63 53.0 4.83e-01 100.0% 72.7%
3416239 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.60 51.0 4.71e-01 100.0% 75.9%
3242544 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 47.0 3.79e-01 95.1% 50.8%
3386077 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.57 35.0 3.95e-01 83.6% 84.4%
3513932 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.55 41.0 3.35e-01 80.3% 68.7%
3790774 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 39.0 3.12e-01 77.0% 46.7%
4927153 375.1.1.63 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular 0.53 32.0 3.33e-01 78.7% 65.5%
3929033 59.1.1.0 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like 0.52 46.0 4.21e-01 100.0% 97.5%
3759836 220.1.1.156 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF30805 0.52 40.0 3.26e-01 88.5% 95.4%
3740587 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.51 43.0 3.63e-01 98.4% 83.5%
4990157 3636.1.1.0 ↗ a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.51 40.0 3.42e-01 95.1% 96.5%
4320387 4294.1.1.1 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.51 37.0 3.01e-01 83.6% 37.9%