←Back to structures
GQ357915.1__ACV50146.1__X__00123
Bact-VirGQ357915.1__ACV50146.1__X__00123
Identity
- Accession:
- GQ357915 ↗
- Kingdom:
- phage
Quality
79.4
mean pLDDT
Taxonomy
TaxID: 665032
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-69
Domain cluster:
rep: MW460245.1__QRE00200.1__X__00157__D1-53
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5wbyC01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.74 | 59.0 | 3.69e-01 | 87.9% | 40.6% |
| 1rwhA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.72 | 54.0 | 4.34e-01 | 81.0% | 92.1% |
| 1q7fB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.72 | 57.0 | 3.67e-01 | 87.9% | 40.4% |
| 3u97A00 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.72 | 50.0 | 4.52e-01 | 72.4% | 63.6% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.72 | 56.0 | 4.31e-01 | 84.5% | 45.2% |
| 3bwsA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.71 | 55.0 | 3.46e-01 | 86.2% | 41.2% |
| 4ci8A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.71 | 58.0 | 3.64e-01 | 91.4% | 46.6% |
| 1mdaH00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.70 | 56.0 | 3.41e-01 | 87.9% | 35.3% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.70 | 50.0 | 4.50e-01 | 74.1% | 58.4% |
| 5x7qA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.70 | 53.0 | 3.56e-01 | 82.8% | 51.8% |
| 1x1iA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.70 | 53.0 | 4.20e-01 | 82.8% | 91.5% |
| 3hrpA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.69 | 56.0 | 3.55e-01 | 91.4% | 43.8% |
| 2lm3A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.69 | 47.0 | 3.25e-01 | 72.4% | 85.4% |
| 4by2B00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.69 | 61.0 | 4.46e-01 | 100.0% | 56.1% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.69 | 48.0 | 4.01e-01 | 74.1% | 53.9% |
| 2x1cB01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.68 | 52.0 | 3.32e-01 | 82.8% | 48.2% |
| 5upiA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.67 | 54.0 | 3.76e-01 | 87.9% | 86.7% |
| 2erfA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 48.0 | 3.33e-01 | 79.3% | 39.2% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.66 | 53.0 | 4.20e-01 | 87.9% | 50.8% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.66 | 47.0 | 4.12e-01 | 75.9% | 52.3% |
| 5f7uA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.65 | 51.0 | 3.47e-01 | 87.9% | 60.6% |
| 1cb8A03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.65 | 53.0 | 4.32e-01 | 91.4% | 96.4% |
| 3rm5B01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.65 | 44.0 | 2.85e-01 | 72.4% | 50.5% |
| 1f1sA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.64 | 53.0 | 4.74e-01 | 93.1% | 93.9% |
| 1k8kF00 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.64 | 44.0 | 3.18e-01 | 72.4% | 52.7% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.64 | 51.0 | 4.20e-01 | 87.9% | 77.4% |
| 1vw5A00 | 3.30.70.1420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Structure from the mobile metagenome of cole harbour salt marsh: integron cassette protein hfx_cass1 | 0.64 | 45.0 | 3.37e-01 | 75.9% | 99.3% |
| 3ffvA00 | 3.40.1580.20 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Syd protein | 0.63 | 48.0 | 3.45e-01 | 84.5% | 60.2% |
| 1jovA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.62 | 46.0 | 3.11e-01 | 87.9% | 54.3% |
| 3d5pA00 | 3.40.1580.10 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like | 0.61 | 47.0 | 3.66e-01 | 84.5% | 75.2% |
| 2hezA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.61 | 47.0 | 2.98e-01 | 84.5% | 99.0% |
| 3ni8A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 48.0 | 3.71e-01 | 89.7% | 57.9% |
| 2yadA00 | 3.30.390.150 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.60 | 44.0 | 4.09e-01 | 79.3% | 98.7% |
| 2q74A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.60 | 52.0 | 4.03e-01 | 96.6% | 54.3% |
| 5hkeA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.60 | 43.0 | 2.77e-01 | 77.6% | 100.0% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.60 | 43.0 | 3.94e-01 | 77.6% | 66.3% |
| 2zfdB00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.58 | 41.0 | 3.30e-01 | 75.9% | 44.0% |
| 5xu6C01 | 3.30.200.110 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Inositol-pentakisphosphate 2-kinase, N-lobe | 0.57 | 38.0 | 3.28e-01 | 72.4% | 90.7% |
| 1qnaA01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.57 | 42.0 | 3.69e-01 | 82.8% | 50.5% |
| 3b8bA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.55 | 46.0 | 3.46e-01 | 96.6% | 59.1% |
| 1tfkA00 | 3.10.450.200 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 37.0 | 3.28e-01 | 70.7% | 46.8% |
| 4bs9A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 42.0 | 3.00e-01 | 87.9% | 80.0% |
| 2pulB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 37.0 | 3.30e-01 | 74.1% | 90.2% |
| 2g7jA00 | 3.90.1150.40 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Protein of unknown function DUF2002 | 0.53 | 41.0 | 3.36e-01 | 84.5% | 73.2% |
| 2r7dA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 41.0 | 4.10e-01 | 82.8% | 85.0% |
| 3vm7A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 41.0 | 3.47e-01 | 84.5% | 92.9% |
| 5o7oC01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.52 | 42.0 | 3.33e-01 | 89.7% | 44.0% |
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.52 | 39.0 | 3.67e-01 | 82.8% | 82.7% |
| 4huzA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 38.0 | 2.95e-01 | 87.9% | 68.9% |
| 2ajrA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 44.0 | 2.87e-01 | 100.0% | 46.4% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3349878 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.82 | 66.0 | 4.50e-01 | 86.2% | 37.0% |
| 3399942 | 9.1.1.49 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 | 0.79 | 58.0 | 4.51e-01 | 77.6% | 48.3% |
| 3585029 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.78 | 64.0 | 3.49e-01 | 89.7% | 8.5% |
| 3613890 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.75 | 66.0 | 3.96e-01 | 100.0% | 32.2% |
| 5079117 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.75 | 61.0 | 3.91e-01 | 91.4% | 52.3% |
| 3246494 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.73 | 57.0 | 3.71e-01 | 84.5% | 23.3% |
| 3878038 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.73 | 62.0 | 4.06e-01 | 94.8% | 49.4% |
| 3708971 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.72 | 59.0 | 3.51e-01 | 91.4% | 46.6% |
| 3993048 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.72 | 56.0 | 4.55e-01 | 84.5% | 51.8% |
| 5044321 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.71 | 55.0 | 3.72e-01 | 84.5% | 59.5% |
| 3500002 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.71 | 59.0 | 3.73e-01 | 91.4% | 50.8% |
| 3600669 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.71 | 51.0 | 4.00e-01 | 75.9% | 44.2% |
| 3612587 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.71 | 44.0 | 4.37e-01 | 72.4% | 60.0% |
| 3371877 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.71 | 58.0 | 3.54e-01 | 93.1% | 43.7% |
| 2771922 | 12.2.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Lyase_8_C | 0.71 | 53.0 | 4.19e-01 | 81.0% | 93.3% |
| 2005 | 12.2.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Lyase_8_C | 0.70 | 54.0 | 5.02e-01 | 84.5% | 91.8% |
| 1275015 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.70 | 56.0 | 4.62e-01 | 87.9% | 56.9% |
| 3259296 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.68 | 53.0 | 3.92e-01 | 84.5% | 32.7% |
| 2426586 | 12.2.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Lyase_8_C | 0.68 | 53.0 | 4.15e-01 | 86.2% | 85.0% |
| 4886650 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.68 | 47.0 | 4.10e-01 | 72.4% | 71.8% |
| 3264242 | 5.1.4.297 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 | 0.68 | 57.0 | 3.45e-01 | 94.8% | 39.2% |
| 4940155 | 3111.1.1.0 ↗ | beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain | 0.68 | 51.0 | 4.54e-01 | 82.8% | 72.9% |
| 3423460 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.67 | 56.0 | 3.33e-01 | 94.8% | 35.3% |
| 4115428 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.67 | 54.0 | 3.82e-01 | 87.9% | 29.4% |
| 3262446 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.67 | 47.0 | 4.04e-01 | 74.1% | 53.8% |
| 3447653 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.67 | 54.0 | 3.39e-01 | 87.9% | 33.4% |
| 3402780 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.67 | 56.0 | 3.39e-01 | 94.8% | 36.1% |
| 3905680 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.66 | 51.0 | 3.06e-01 | 82.8% | 20.5% |
| 3373382 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.66 | 57.0 | 3.48e-01 | 100.0% | 43.0% |
| 3936855 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.65 | 58.0 | 3.87e-01 | 100.0% | 62.7% |
| 3443914 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.64 | 47.0 | 3.52e-01 | 81.0% | 74.0% |
| 3629704 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 50.0 | 3.66e-01 | 86.2% | 71.0% |
| 3514010 | 5.1.4.218 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd | 0.63 | 54.0 | 3.46e-01 | 96.6% | 49.1% |
| 3931562 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.63 | 56.0 | 3.75e-01 | 100.0% | 62.2% |
| 3222419 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.63 | 43.0 | 4.01e-01 | 72.4% | 57.3% |
| 3431244 | 5.1.4.122 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF295 | 0.63 | 51.0 | 3.18e-01 | 91.4% | 36.5% |
| 4393929 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.62 | 53.0 | 3.32e-01 | 98.3% | 85.9% |
| 4609138 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.61 | 50.0 | 3.74e-01 | 93.1% | 53.3% |
| 3743741 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.60 | 45.0 | 4.04e-01 | 82.8% | 78.8% |
| 5013346 | 241.1.1.30 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 | 0.60 | 47.0 | 3.65e-01 | 89.7% | 82.9% |
| 4950477 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.59 | 44.0 | 4.10e-01 | 81.0% | 66.7% |
| 3199320 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.59 | 48.0 | 3.89e-01 | 91.4% | 74.8% |
| 4951170 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.58 | 40.0 | 3.77e-01 | 72.4% | 67.1% |
| 4938262 | 3435.1.1.10 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › PF27341 | 0.58 | 46.0 | 3.13e-01 | 89.7% | 72.9% |
| 3691956 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.58 | 44.0 | 2.93e-01 | 84.5% | 26.5% |
| 3432908 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.58 | 47.0 | 2.98e-01 | 94.8% | 55.9% |
| 4995814 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.56 | 47.0 | 3.51e-01 | 98.3% | 35.0% |
| 4279385 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.56 | 47.0 | 3.88e-01 | 93.1% | 74.3% |
| 4928595 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.56 | 46.0 | 3.88e-01 | 96.6% | 52.4% |
| 3708545 | 59.1.1.0 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like | 0.56 | 43.0 | 3.93e-01 | 86.2% | 100.0% |
| 3223859 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 40.0 | 3.78e-01 | 84.5% | 62.9% |
| 3606615 | 241.10.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain | 0.56 | 48.0 | 4.19e-01 | 98.3% | 68.9% |
| 3926705 | 6129.1.1.9 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › RGM_C | 0.56 | 45.0 | 3.28e-01 | 91.4% | 51.4% |
| 4000493 | 6129.1.1.9 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › RGM_C | 0.55 | 45.0 | 3.24e-01 | 91.4% | 49.1% |
| 4951171 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.55 | 39.0 | 3.70e-01 | 75.9% | 68.6% |
| 3194733 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 43.0 | 3.51e-01 | 91.4% | 88.3% |
| 3495285 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.55 | 43.0 | 3.27e-01 | 89.7% | 57.3% |
| 3597793 | 5094.1.1.0 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like | 0.54 | 40.0 | 3.09e-01 | 98.3% | 34.1% |
| 3403199 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.54 | 42.0 | 3.47e-01 | 86.2% | 78.2% |
| 3749834 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.54 | 40.0 | 4.15e-01 | 86.2% | 85.5% |
| 4649120 | 206.1.2.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin | 0.54 | 39.0 | 2.61e-01 | 81.0% | 86.3% |
| 3267885 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.53 | 41.0 | 3.27e-01 | 87.9% | 45.9% |
| 3992505 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.53 | 44.0 | 2.98e-01 | 100.0% | 49.8% |
| 3874056 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.53 | 39.0 | 3.97e-01 | 87.9% | 85.5% |
D2
medium
residues 70-129
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g7xB00 | 3.30.1150.10 | Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › | 0.73 | 36.0 | 2.96e-01 | 83.3% | 29.4% |
| 1mgtA01 | 3.30.160.70 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain | 0.69 | 52.0 | 4.61e-01 | 100.0% | 55.7% |
| 1vx7H01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.63 | 51.0 | 4.52e-01 | 88.3% | 98.8% |
| 4esnA00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.59 | 40.0 | 3.73e-01 | 86.7% | 55.1% |
| 3fewX02 | 3.30.1310.40 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › | 0.58 | 42.0 | 3.64e-01 | 76.7% | 78.9% |
| 1u04A04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.58 | 49.0 | 3.38e-01 | 96.7% | 94.2% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.57 | 41.0 | 3.22e-01 | 93.3% | 37.5% |
| 3ttcA03 | 3.30.420.360 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.57 | 42.0 | 3.53e-01 | 85.0% | 43.0% |
| 1m1cA00 | 3.90.1840.10 | Alpha Beta › Alpha-Beta Complex › Major capsid protein › Major capsid protein | 0.56 | 45.0 | 2.62e-01 | 93.3% | 77.6% |
| 1tu1A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.55 | 45.0 | 3.52e-01 | 96.7% | 43.1% |
| 2jsnA00 | 2.30.42.40 | Mainly Beta › Roll › Pdz3 Domain › | 0.54 | 39.0 | 3.43e-01 | 78.3% | 66.7% |
| 2o62A02 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 41.0 | 3.26e-01 | 96.7% | 38.7% |
| 3gb0A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 44.0 | 2.97e-01 | 100.0% | 97.7% |
| 2eaqA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 41.0 | 3.68e-01 | 91.7% | 71.9% |
| 4bv4R00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.50 | 36.0 | 2.23e-01 | 98.3% | 10.7% |
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.50 | 36.0 | 3.41e-01 | 88.3% | 61.5% |
| 3sd2A01 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 40.0 | 3.74e-01 | 91.7% | 88.3% |
| 1wguA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 35.0 | 2.92e-01 | 75.0% | 53.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3732600 | 3957.1.1.1 ↗ | a+b two layers › EKC/KEOPS complex subunit GON7 › EKC/KEOPS complex subunit GON7 › EKC/KEOPS complex subunit GON7 › Gon7 | 0.70 | 53.0 | 4.63e-01 | 81.7% | 73.3% |
| 4002036 | 386.1.1.271 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7565 | 0.68 | 43.0 | 4.23e-01 | 83.3% | 60.0% |
| 3513090 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.62 | 40.0 | 3.13e-01 | 76.7% | 32.0% |
| 3613468 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.59 | 45.0 | 4.48e-01 | 88.3% | 81.5% |
| 11163 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.58 | 49.0 | 3.38e-01 | 96.7% | 94.2% |
| 4527834 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.58 | 43.0 | 4.24e-01 | 78.3% | 75.4% |
| 3786358 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.57 | 47.0 | 4.15e-01 | 95.0% | 94.7% |
| 4012965 | 4351.1.1.0 ↗ | alpha arrays › ATP12-like › ATP12-like › ATP12-like | 0.57 | 46.0 | 3.10e-01 | 95.0% | 22.4% |
| 1769944 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.54 | 39.0 | 3.53e-01 | 78.3% | 72.7% |
| 3244147 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.50 | 39.0 | 3.44e-01 | 90.0% | 64.0% |