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GQ357915.1__ACV50218.1__X__00195
Bact-VirGQ357915.1__ACV50218.1__X__00195
Identity
- Accession:
- GQ357915 ↗
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Taxonomy
TaxID: 665032
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-144
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x8bA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 26.0 | 3.16e-01 | 99.3% | 78.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3702319 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.56 | 28.0 | 3.60e-01 | 81.1% | 82.4% |
| 3715861 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 38.0 | 2.59e-01 | 78.3% | 33.1% |
D2
high
residues 157-224
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5a48B00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.59 | 42.0 | 3.78e-01 | 75.0% | 63.5% |
| 3dgpB00 | 3.30.70.1220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like | 0.58 | 37.0 | 3.81e-01 | 82.4% | 68.3% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.57 | 37.0 | 3.74e-01 | 83.8% | 64.8% |
| 4oloB00 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.56 | 42.0 | 4.01e-01 | 82.4% | 69.0% |
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 38.0 | 3.74e-01 | 72.1% | 76.3% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.55 | 38.0 | 3.09e-01 | 100.0% | 38.9% |
| 1konA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.55 | 36.0 | 3.56e-01 | 80.9% | 61.3% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.55 | 37.0 | 3.20e-01 | 72.1% | 66.9% |
| 6j0eB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 38.0 | 3.27e-01 | 73.5% | 52.1% |
| 3dgpA00 | 3.30.70.2610 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 35.0 | 3.68e-01 | 77.9% | 72.6% |
| 2i0zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 47.0 | 3.25e-01 | 100.0% | 96.5% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.54 | 38.0 | 3.70e-01 | 82.4% | 66.2% |
| 2h5eA03 | 3.30.70.3280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptide chain release factor 3, domain III | 0.53 | 36.0 | 2.95e-01 | 82.4% | 35.0% |
| 5yk4A04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.53 | 46.0 | 3.73e-01 | 100.0% | 62.5% |
| 1nv8A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 36.0 | 2.66e-01 | 72.1% | 88.3% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 39.0 | 3.50e-01 | 82.4% | 85.6% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.50 | 38.0 | 2.99e-01 | 83.8% | 88.5% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3290892 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.67 | 39.0 | 3.36e-01 | 95.6% | 37.1% |
| 5009323 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.65 | 41.0 | 3.15e-01 | 100.0% | 28.6% |
| 3784497 | 109.4.1.2176 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EZ, Importin_rep_4, Importin_rep_6, TPR_IMB1, TPR_IPO5 | 0.64 | 48.0 | 2.65e-01 | 77.9% | 69.5% |
| 3958566 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.62 | 41.0 | 3.85e-01 | 70.6% | 72.2% |
| 4973555 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.61 | 38.0 | 2.82e-01 | 100.0% | 24.7% |
| 5060568 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.58 | 35.0 | 3.70e-01 | 80.9% | 66.7% |
| 5013841 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.58 | 40.0 | 3.39e-01 | 75.0% | 48.8% |
| 4002063 | 109.4.1.1593 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4, Importin_rep_5, Importin_rep_6, TPR_IMB1, TPR_IPO5 | 0.57 | 45.0 | 2.46e-01 | 85.3% | 47.4% |
| 5031966 | 5103.1.1.0 ↗ | a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 | 0.56 | 42.0 | 3.66e-01 | 80.9% | 59.0% |
| 3975516 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.56 | 41.0 | 3.53e-01 | 97.1% | 50.5% |
| 2625607 | 109.4.1.1593 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4, Importin_rep_5, Importin_rep_6, TPR_IMB1, TPR_IPO5 | 0.55 | 39.0 | 2.18e-01 | 76.5% | 54.9% |
| 3630104 | 192.24.1.6 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.54 | 39.0 | 2.43e-01 | 75.0% | 90.5% |
| 4172564 | 101.1.9.134 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2067 | 0.54 | 34.0 | 3.64e-01 | 73.5% | 73.3% |
| 3698504 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.54 | 46.0 | 3.04e-01 | 98.5% | 27.7% |
| 3308472 | 304.9.1.102 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_NFXL1 | 0.53 | 36.0 | 3.42e-01 | 82.4% | 60.0% |
| 3530014 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.53 | 40.0 | 2.32e-01 | 83.8% | 70.8% |
| 3555106 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.52 | 46.0 | 2.99e-01 | 100.0% | 29.5% |
| 3279459 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.51 | 35.0 | 2.94e-01 | 70.6% | 69.1% |
| 5053351 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 39.0 | 3.58e-01 | 95.6% | 61.1% |
| 3599022 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 41.0 | 2.61e-01 | 98.5% | 90.7% |
| 4994568 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.51 | 36.0 | 3.91e-01 | 77.9% | 94.5% |
| 3743247 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.51 | 44.0 | 2.85e-01 | 100.0% | 22.9% |