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GQ379227.1__ADE43449.1__phiSA1p05__00005
Bact-VirGQ379227.1__ADE43449.1__phiSA1p05__00005
Identity
- Accession:
- GQ379227 ↗
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Taxonomy
TaxID: 747763
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-85
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4uyiA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.55 | 37.0 | 3.08e-01 | 89.5% | 40.9% |
| 7dklA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 39.0 | 3.46e-01 | 77.6% | 83.3% |
| 4c89C00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 44.0 | 2.95e-01 | 100.0% | 72.3% |
| 7b1xA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 43.0 | 3.00e-01 | 100.0% | 73.6% |
| 7ob9B02 | 3.90.1800.10 | Alpha Beta › Alpha-Beta Complex › DCoH-like › RNA polymerase alpha subunit dimerisation domain | 0.51 | 30.0 | 2.78e-01 | 80.3% | 41.2% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 38.0 | 4.01e-01 | 100.0% | 88.6% |
| 4q05A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 42.0 | 2.90e-01 | 100.0% | 65.7% |
| 3apuB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 40.0 | 3.21e-01 | 90.8% | 83.7% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.50 | 32.0 | 3.52e-01 | 78.9% | 81.4% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 36.0 | 3.02e-01 | 77.6% | 60.4% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3621451 | 398.1.1.0 ↗ | few secondary structure elements › Btk/CHORD zinc fingers › Btk/CHORD zinc fingers › Btk/CHORD zinc fingers | 0.64 | 29.0 | 4.02e-01 | 82.9% | 91.4% |
| 3928506 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.55 | 36.0 | 3.52e-01 | 81.6% | 60.0% |
| 5049528 | 7601.1.1.2 ↗ | a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › DUF362 | 0.54 | 39.0 | 2.63e-01 | 77.6% | 38.7% |
| 4937915 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.53 | 40.0 | 3.78e-01 | 84.2% | 89.9% |
| 3995170 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 42.0 | 2.50e-01 | 92.1% | 21.1% |
| 4983272 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.53 | 42.0 | 2.92e-01 | 90.8% | 34.8% |
| 3738378 | 109.2.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Prenyltrans | 0.53 | 38.0 | 2.58e-01 | 80.3% | 35.4% |
| 4935838 | 102.1.2.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase | 0.53 | 37.0 | 2.69e-01 | 100.0% | 25.5% |
| None | — | 0.52 | 41.0 | 2.51e-01 | 90.8% | 23.8% | |
| 3966537 | 140.1.1.8 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 | 0.52 | 41.0 | 2.55e-01 | 89.5% | 29.1% |
| 3411783 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.52 | 40.0 | 2.78e-01 | 85.5% | 57.5% |
| 3214527 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.51 | 38.0 | 3.27e-01 | 80.3% | 72.8% |
| 4937094 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.51 | 38.0 | 3.60e-01 | 84.2% | 96.0% |
| 3607536 | 1189.1.1.2 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG_B | 0.51 | 37.0 | 2.45e-01 | 84.2% | 16.7% |
| 5041799 | 2008.1.1.220 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_10 | 0.51 | 44.0 | 3.66e-01 | 98.7% | 70.0% |
| 4937366 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.51 | 39.0 | 3.68e-01 | 84.2% | 92.6% |
| 4999327 | 2002.3.1.12 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › DUF2334 | 0.51 | 42.0 | 2.93e-01 | 97.4% | 68.5% |
| 3721311 | 109.21.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nup96 | 0.51 | 36.0 | 2.18e-01 | 76.3% | 66.9% |
| 4010715 | 243.3.1.17 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Imm-NTF2-2 | 0.51 | 39.0 | 4.04e-01 | 100.0% | 91.4% |
| 4968449 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.50 | 39.0 | 4.13e-01 | 98.7% | 100.0% |
| None | — | 0.50 | 39.0 | 2.70e-01 | 88.2% | 71.2% |