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GQ403788.1__ADD25701.1__X__00004
Bact-VirGQ403788.1__ADD25701.1__X__00004
Identity
- Accession:
- GQ403788 ↗
- Kingdom:
- phage
Quality
67.6
mean pLDDT
Taxonomy
TaxID: 741942
Cluster
View cluster (42 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 141-197
D2
medium
residues 219-307
Domain cluster:
rep: NC_009814.1__YP_001468788.1__LiPP35_gp04__00004__D211-302
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04233.20 best | Phage_Mu_F | 30.2 | 8.90e-07 | 65.2% | 39.3% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v8iA02 | 2.30.30.880 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 28.0 | 3.27e-01 | 84.3% | 79.2% |
| 3tssA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 24.0 | 2.62e-01 | 83.1% | 49.3% |
| 6jzaA00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.50 | 26.0 | 2.72e-01 | 87.6% | 46.9% |
| 2dloA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.50 | 29.0 | 3.07e-01 | 100.0% | 63.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964369 | 6108.1.1.8 ↗ | alpha bundles › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Phage_Mu_F | 0.86 | 53.0 | 3.72e-01 | 70.8% | 22.4% |
| 4032640 | 601.19.1.3 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Phage_Mu_F | 0.82 | 50.0 | 3.34e-01 | 73.0% | 17.7% |