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GQ403788.1__ADD25720.1__X__00023
Bact-VirGQ403788.1__ADD25720.1__X__00023
Identity
- Accession:
- GQ403788 ↗
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Taxonomy
TaxID: 741942
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-70
Domain cluster:
rep: MK448925.1__QBX27450.1__Javan386_0051__00007__D5-66
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kxaA02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.83 | 73.0 | 7.26e-01 | 100.0% | 92.4% |
| 1lliA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.83 | 73.0 | 6.42e-01 | 95.2% | 69.7% |
| 3bs3A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.83 | 70.0 | 7.13e-01 | 100.0% | 96.7% |
| 2awiA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.82 | 71.0 | 7.00e-01 | 100.0% | 89.6% |
| 1y7yA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.81 | 67.0 | 6.53e-01 | 95.2% | 82.6% |
| 2r1jL00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.81 | 68.0 | 6.76e-01 | 96.8% | 89.4% |
| 2kpjA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.78 | 66.0 | 6.40e-01 | 95.2% | 84.3% |
| 1b0nA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 69.0 | 5.83e-01 | 100.0% | 62.1% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 66.0 | 6.53e-01 | 100.0% | 92.4% |
| 2ef8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.76 | 67.0 | 6.06e-01 | 96.8% | 81.0% |
| 7xi5A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.76 | 56.0 | 6.02e-01 | 81.0% | 98.0% |
| 1r69A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.76 | 63.0 | 6.40e-01 | 96.8% | 93.7% |
| 6b9sB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 61.0 | 5.84e-01 | 92.1% | 78.1% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 65.0 | 6.03e-01 | 100.0% | 75.6% |
| 7vjmB01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 57.0 | 5.67e-01 | 82.5% | 87.5% |
| 3ivpD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 60.0 | 5.70e-01 | 95.2% | 76.0% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.74 | 45.0 | 5.11e-01 | 95.2% | 83.0% |
| 1uhsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 46.0 | 5.00e-01 | 95.2% | 75.9% |
| 2ewtA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.73 | 63.0 | 6.04e-01 | 100.0% | 84.5% |
| 3zhiA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 62.0 | 5.90e-01 | 95.2% | 93.2% |
| 2ys9A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 44.0 | 4.27e-01 | 95.2% | 55.7% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 55.0 | 5.37e-01 | 95.2% | 74.6% |
| 2wusS00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 60.0 | 5.58e-01 | 100.0% | 87.8% |
| 1y9qA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 61.0 | 5.59e-01 | 100.0% | 74.1% |
| 3fymA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 59.0 | 5.52e-01 | 100.0% | 84.1% |
| 1x2mA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 44.0 | 4.74e-01 | 95.2% | 75.9% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 42.0 | 3.54e-01 | 100.0% | 37.5% |
| 1e3oC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 46.0 | 5.17e-01 | 100.0% | 89.6% |
| 4ybaA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.69 | 58.0 | 5.46e-01 | 96.8% | 84.4% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.69 | 38.0 | 3.27e-01 | 100.0% | 36.1% |
| 1zq3P00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 44.0 | 4.28e-01 | 95.2% | 60.3% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 60.0 | 5.63e-01 | 100.0% | 83.1% |
| 2ld5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 46.0 | 4.50e-01 | 95.2% | 65.7% |
| 2kt0A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 44.0 | 4.95e-01 | 96.8% | 89.4% |
| 1g3nC01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 55.0 | 4.44e-01 | 88.9% | 81.7% |
| 1x2nA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 47.0 | 4.82e-01 | 93.7% | 76.7% |
| 2ecbA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 43.0 | 4.74e-01 | 93.7% | 82.4% |
| 1neqA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 55.0 | 5.33e-01 | 100.0% | 82.4% |
| 4wcgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 40.0 | 4.10e-01 | 100.0% | 62.3% |
| 7ar7E01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.66 | 44.0 | 4.44e-01 | 95.2% | 68.3% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.66 | 51.0 | 4.87e-01 | 88.9% | 72.4% |
| 5vyoD00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.62 | 46.0 | 3.38e-01 | 100.0% | 27.7% |
| 2x26A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.61 | 52.0 | 3.69e-01 | 93.7% | 71.9% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 42.0 | 4.17e-01 | 100.0% | 68.2% |
| 8e9gE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.60 | 44.0 | 4.50e-01 | 92.1% | 77.8% |
| 4mn0A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.59 | 45.0 | 3.40e-01 | 88.9% | 78.5% |
| 2ffhA03 | 1.10.260.30 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain | 0.58 | 53.0 | 4.47e-01 | 100.0% | 79.0% |
| 2mgqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 35.0 | 3.50e-01 | 98.4% | 58.8% |
| 1cxsA02 | 3.40.228.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 | 0.56 | 49.0 | 3.29e-01 | 98.4% | 39.0% |
| 4edgA03 | 1.20.50.20 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle | 0.56 | 40.0 | 4.10e-01 | 74.6% | 95.0% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.56 | 45.0 | 3.67e-01 | 93.7% | 61.8% |
| 1o4xA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 36.0 | 3.79e-01 | 93.7% | 79.6% |
| 2vpzA03 | 3.40.228.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 | 0.53 | 46.0 | 3.12e-01 | 100.0% | 36.5% |
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.53 | 40.0 | 3.32e-01 | 82.5% | 62.8% |
| 2rrdA00 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.51 | 43.0 | 3.78e-01 | 100.0% | 63.4% |
| 3cdhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.01e-01 | 81.0% | 82.8% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3969553 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.83 | 72.0 | 6.76e-01 | 96.8% | 78.7% |
| 317430 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.82 | 71.0 | 7.04e-01 | 100.0% | 89.6% |
| 3956747 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.82 | 69.0 | 6.85e-01 | 95.2% | 89.2% |
| 3944622 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.80 | 72.0 | 6.65e-01 | 100.0% | 80.0% |
| 3288109 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.78 | 70.0 | 6.80e-01 | 100.0% | 92.9% |
| 4075146 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.78 | 69.0 | 5.40e-01 | 100.0% | 47.7% |
| 5039762 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.77 | 66.0 | 5.74e-01 | 100.0% | 63.2% |
| 3281381 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.77 | 66.0 | 5.58e-01 | 96.8% | 75.2% |
| 4216060 | 101.1.4.27 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N | 0.75 | 67.0 | 6.23e-01 | 100.0% | 81.2% |
| 1185984 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.75 | 65.0 | 5.79e-01 | 96.8% | 78.9% |
| 3941643 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.75 | 65.0 | 6.27e-01 | 100.0% | 87.1% |
| 2581392 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.75 | 65.0 | 6.29e-01 | 100.0% | 87.3% |
| 3590480 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.73 | 61.0 | 5.16e-01 | 96.8% | 55.2% |
| 169675 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.72 | 60.0 | 5.61e-01 | 95.2% | 74.4% |
| 139730 | 101.1.4.16 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 | 0.71 | 61.0 | 5.56e-01 | 100.0% | 83.9% |
| 3589516 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.71 | 55.0 | 5.41e-01 | 88.9% | 78.6% |
| 3987782 | 101.1.4.16 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 | 0.71 | 62.0 | 5.38e-01 | 100.0% | 70.0% |
| 3985846 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.70 | 59.0 | 5.28e-01 | 95.2% | 67.8% |
| 3218375 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 47.0 | 5.04e-01 | 96.8% | 80.0% |
| 4032282 | 101.1.4.29 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF2316 | 0.69 | 60.0 | 5.48e-01 | 100.0% | 88.2% |
| 4999897 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.67 | 57.0 | 5.44e-01 | 100.0% | 92.0% |
| 4004379 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.66 | 57.0 | 5.59e-01 | 100.0% | 91.4% |
| 3576912 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.66 | 46.0 | 5.18e-01 | 95.2% | 95.8% |
| 3230818 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.65 | 53.0 | 5.00e-01 | 87.3% | 73.3% |
| 3289244 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.64 | 42.0 | 4.17e-01 | 100.0% | 64.6% |
| 3971300 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.64 | 50.0 | 3.62e-01 | 87.3% | 71.1% |
| 3606717 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 43.0 | 4.74e-01 | 92.1% | 90.0% |
| 3631430 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 48.0 | 4.22e-01 | 95.2% | 54.7% |
| 4683153 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.62 | 44.0 | 3.79e-01 | 95.2% | 47.0% |
| 3507798 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.62 | 53.0 | 5.30e-01 | 100.0% | 90.8% |
| 1674868 | 101.1.1.19 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SRP_SPB | 0.60 | 54.0 | 4.48e-01 | 100.0% | 85.5% |
| 3211563 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.60 | 36.0 | 3.38e-01 | 100.0% | 49.3% |
| 3650393 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 54.0 | 3.33e-01 | 100.0% | 25.4% |
| 4255639 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.58 | 44.0 | 4.03e-01 | 84.1% | 89.4% |
| 3638575 | 109.3.1.170 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_4 | 0.57 | 43.0 | 2.90e-01 | 82.5% | 32.4% |
| 4288489 | 4973.1.1.2 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaG_cat_HB | 0.57 | 44.0 | 4.13e-01 | 81.0% | 80.0% |
| 1719150 | 3238.2.1.0 ↗ | alpha superhelices › Mitochondrial mTERF-like › Transcription activator-like effector (TALE) › Transcription activator-like effector (TALE) | 0.57 | 42.0 | 2.58e-01 | 79.4% | 17.5% |
| 1721457 | 3238.2.1.0 ↗ | alpha superhelices › Mitochondrial mTERF-like › Transcription activator-like effector (TALE) › Transcription activator-like effector (TALE) | 0.57 | 42.0 | 2.58e-01 | 79.4% | 17.5% |
| 5014388 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.56 | 45.0 | 3.19e-01 | 90.5% | 54.4% |
| None | — | 0.51 | 40.0 | 2.71e-01 | 85.7% | 33.2% | |
| 4068007 | 101.1.2.233 ↗ | alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH | 0.50 | 38.0 | 3.71e-01 | 85.7% | 91.4% |