←Back to structures
GQ403788.1__ADD25731.1__X__00034
Bact-VirGQ403788.1__ADD25731.1__X__00034
Identity
- Accession:
- GQ403788 ↗
- Kingdom:
- phage
Quality
75.5
mean pLDDT
Taxonomy
TaxID: 741942
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-57
Domain cluster:
rep: GQ403788.1__ADD25732.1__X__00035__D4-63
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ds5A00 | 6.20.220.10 | Special › Other non-globular › Erythroid Transcription Factor GATA-1; Chain A › ClpX chaperone, C4-type zinc finger domain | 0.78 | 53.0 | 5.64e-01 | 100.0% | 81.4% |
| 1gkuB06 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.71 | 58.0 | 4.14e-01 | 95.9% | 78.8% |
| 3pamB00 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.67 | 48.0 | 3.02e-01 | 73.5% | 42.4% |
| 4jcjB01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.67 | 44.0 | 4.05e-01 | 95.9% | 52.3% |
| 6wm6A01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.66 | 49.0 | 3.17e-01 | 79.6% | 38.2% |
| 2fnaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 44.0 | 3.90e-01 | 71.4% | 56.2% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 41.0 | 3.56e-01 | 71.4% | 58.3% |
| 1yg2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 41.0 | 3.59e-01 | 73.5% | 49.4% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 39.0 | 3.36e-01 | 71.4% | 45.7% |
| 1rz4A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 3.55e-01 | 81.6% | 45.7% |
| 2v9vA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 3.87e-01 | 81.6% | 81.2% |
| 3ui3A02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 3.56e-01 | 85.7% | 83.7% |
| 2qm3A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 37.0 | 3.22e-01 | 73.5% | 57.8% |
| 2vlaA03 | 1.10.10.2090 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 41.0 | 3.20e-01 | 87.8% | 76.7% |
| 5hvqC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 3.19e-01 | 81.6% | 63.3% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 3.18e-01 | 75.5% | 61.1% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 39.0 | 3.26e-01 | 75.5% | 56.2% |
| 3e3rA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 38.0 | 3.22e-01 | 87.8% | 59.6% |
| 1oltA02 | 1.10.10.920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 37.0 | 3.26e-01 | 81.6% | 63.0% |
| 2xueA01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.51 | 37.0 | 2.37e-01 | 81.6% | 84.0% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 39.0 | 3.31e-01 | 87.8% | 98.9% |
| 2fbkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 36.0 | 2.69e-01 | 81.6% | 32.1% |
| 1x62A01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.50 | 44.0 | 4.14e-01 | 100.0% | 81.7% |
| 1r7jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 37.0 | 3.22e-01 | 87.8% | 54.4% |
| 1lvaA04 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 36.0 | 3.46e-01 | 81.6% | 78.3% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1175632 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.70 | 48.0 | 4.19e-01 | 73.5% | 54.7% |
| 4955345 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.69 | 48.0 | 4.08e-01 | 73.5% | 56.2% |
| 3329707 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.65 | 45.0 | 3.04e-01 | 73.5% | 24.2% |
| 5042212 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 42.0 | 3.08e-01 | 73.5% | 30.7% |
| 5005181 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 45.0 | 3.25e-01 | 95.9% | 72.0% |
| 4050998 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.57 | 42.0 | 2.87e-01 | 81.6% | 74.4% |
| 5015794 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 41.0 | 3.63e-01 | 81.6% | 65.0% |
| 3936428 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 40.0 | 3.73e-01 | 79.6% | 87.7% |
| 3716926 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 41.0 | 2.33e-01 | 95.9% | 6.6% |
| 5036278 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 39.0 | 3.73e-01 | 81.6% | 81.7% |
| 3970723 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 37.0 | 3.19e-01 | 71.4% | 63.5% |
| 3739179 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 40.0 | 3.87e-01 | 87.8% | 91.7% |
| 3481514 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 44.0 | 3.25e-01 | 100.0% | 41.4% |
| 3978224 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.52 | 37.0 | 3.12e-01 | 73.5% | 61.1% |
| 3973740 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.52 | 39.0 | 3.27e-01 | 87.8% | 51.0% |
| 5021436 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 3.77e-01 | 100.0% | 78.7% |
| 3819614 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 37.0 | 3.33e-01 | 83.7% | 57.3% |
| 3407956 | 101.1.2.265 ↗ | alpha arrays › HTH › HTH › winged helix domain › Stork_head | 0.50 | 40.0 | 2.82e-01 | 95.9% | 34.7% |