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GQ478084.1__ACZ63925.1__X__00028
Bact-VirGQ478084.1__ACZ63925.1__X__00028
Identity
- Accession:
- GQ478084 ↗
- Kingdom:
- phage
Quality
92.6
mean pLDDT
Taxonomy
TaxID: 673835
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-76
Domain cluster:
rep: MK448710.1__QBX16110.1__Javan233_0030__00030__D34-99
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p84A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.88 | 71.0 | 6.97e-01 | 92.9% | 80.8% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 55.0 | 5.41e-01 | 94.3% | 98.6% |
| 1ddvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 46.0 | 4.13e-01 | 78.6% | 85.6% |
| 4wsfA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 45.0 | 3.91e-01 | 75.7% | 76.6% |
| 2akkA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 52.0 | 5.13e-01 | 94.3% | 97.3% |
| 3fssA01 | 2.30.29.120 | Mainly Beta › Roll › PH-domain like › | 0.61 | 44.0 | 3.64e-01 | 78.6% | 67.6% |
| 3jcuB02 | 3.10.680.10 | Alpha Beta › Roll › Photosystem II CP47 reaction center protein › Photosystem II CP47 reaction center protein | 0.59 | 43.0 | 3.23e-01 | 75.7% | 49.7% |
| 4q8gA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 45.0 | 3.00e-01 | 90.0% | 45.3% |
| 2crfA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 41.0 | 3.51e-01 | 77.1% | 79.2% |
| 4chmB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 43.0 | 3.64e-01 | 81.4% | 79.8% |
| 3p54A02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.58 | 40.0 | 4.00e-01 | 77.1% | 71.8% |
| 2d9wA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 41.0 | 3.65e-01 | 78.6% | 87.3% |
| 6rtqA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.56 | 45.0 | 3.78e-01 | 92.9% | 93.2% |
| 6epkA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.56 | 40.0 | 4.01e-01 | 77.1% | 76.1% |
| 2rsvA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.56 | 41.0 | 2.56e-01 | 78.6% | 24.8% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 40.0 | 3.95e-01 | 75.7% | 81.3% |
| 3isxA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.55 | 47.0 | 4.35e-01 | 92.9% | 84.3% |
| 3vl9B00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.55 | 43.0 | 3.16e-01 | 90.0% | 55.7% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 41.0 | 4.02e-01 | 84.3% | 95.1% |
| 4hfsA00 | 2.60.120.1270 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 41.0 | 3.06e-01 | 87.1% | 80.3% |
| 2ktyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 38.0 | 3.16e-01 | 77.1% | 79.9% |
| 3uc2A00 | 2.60.40.3340 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4426 | 0.53 | 37.0 | 3.13e-01 | 72.9% | 91.1% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 45.0 | 4.18e-01 | 98.6% | 79.1% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 3.89e-01 | 82.9% | 93.3% |
| 2v5oA03 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.53 | 40.0 | 3.31e-01 | 85.7% | 75.4% |
| 1t6eX01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.52 | 40.0 | 3.13e-01 | 88.6% | 80.5% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.52 | 35.0 | 3.35e-01 | 71.4% | 62.1% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.51 | 42.0 | 3.92e-01 | 91.4% | 77.8% |
| 1cr5A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.51 | 38.0 | 3.72e-01 | 94.3% | 72.7% |
| 1b9vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 40.0 | 2.64e-01 | 94.3% | 95.6% |
| 2cr4A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 37.0 | 3.32e-01 | 78.6% | 100.0% |
| 3l48A01 | 2.60.40.2070 | Mainly Beta › Sandwich › Immunoglobulin-like › PapC, C-terminal domain | 0.50 | 35.0 | 3.43e-01 | 97.1% | 67.1% |
| 4cgyA01 | 3.40.50.140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 40.0 | 3.12e-01 | 92.9% | 85.2% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4024915 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.66 | 56.0 | 5.84e-01 | 94.3% | 100.0% |
| 3486329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 55.0 | 5.75e-01 | 94.3% | 100.0% |
| 4228016 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.65 | 55.0 | 3.94e-01 | 92.9% | 96.0% |
| 3910727 | 4.1.1.353 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_TNRC18 | 0.65 | 50.0 | 5.19e-01 | 84.3% | 98.5% |
| 1271326 | 220.1.1.54 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_18 | 0.63 | 46.0 | 3.74e-01 | 78.6% | 63.5% |
| 3842576 | 220.1.1.67 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 | 0.62 | 45.0 | 3.81e-01 | 77.1% | 71.7% |
| 4266110 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.62 | 55.0 | 5.60e-01 | 100.0% | 100.0% |
| 3709057 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 51.0 | 4.50e-01 | 98.6% | 61.0% |
| 4929001 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 44.0 | 4.50e-01 | 77.1% | 96.9% |
| 3167809 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 44.0 | 3.24e-01 | 78.6% | 44.9% |
| 3815479 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 48.0 | 4.78e-01 | 88.6% | 94.7% |
| 4079234 | 220.1.1.54 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_18 | 0.60 | 43.0 | 3.55e-01 | 78.6% | 65.0% |
| 3609094 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 51.0 | 4.05e-01 | 98.6% | 62.6% |
| 3270655 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.59 | 46.0 | 3.26e-01 | 91.4% | 89.8% |
| 2697431 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.57 | 41.0 | 3.69e-01 | 78.6% | 83.3% |
| 3404671 | 6.1.1.1 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › FGF | 0.57 | 41.0 | 3.32e-01 | 75.7% | 94.2% |
| 2491145 | 219.1.1.50 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 | 0.57 | 44.0 | 2.72e-01 | 88.6% | 21.2% |
| 3188574 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.56 | 45.0 | 4.66e-01 | 94.3% | 96.9% |
| 3934185 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.55 | 41.0 | 3.41e-01 | 84.3% | 88.5% |
| 3920534 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.55 | 35.0 | 2.99e-01 | 72.9% | 36.8% |
| None | — | 0.54 | 40.0 | 3.21e-01 | 78.6% | 60.7% | |
| 4028916 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.54 | 43.0 | 3.86e-01 | 94.3% | 88.2% |
| 3493244 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.54 | 42.0 | 2.77e-01 | 87.1% | 66.4% |
| 1146564 | 11.1.1.183 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4426 | 0.52 | 35.0 | 3.07e-01 | 71.4% | 93.3% |
| 3924385 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.52 | 43.0 | 2.92e-01 | 97.1% | 41.0% |
| 5000358 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.52 | 43.0 | 3.69e-01 | 94.3% | 55.7% |
| 3858885 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 3.93e-01 | 77.1% | 96.4% |
| 5053906 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.51 | 38.0 | 4.04e-01 | 92.9% | 95.0% |
| 3737235 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 33.0 | 3.45e-01 | 81.4% | 72.3% |
| 3602793 | 7512.1.1.24 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_5 | 0.51 | 42.0 | 2.94e-01 | 92.9% | 36.5% |
| 3622645 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.50 | 35.0 | 3.19e-01 | 72.9% | 90.5% |