Back to structures

GQ919031.1__ACX71115.1__pZL12.38__00038

Bact-Vir

GQ919031.1__ACX71115.1__pZL12.38__00038

Identity

Accession:
GQ919031 ↗
Kingdom:
phage

Quality

92.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-75
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 46.0 4.00e-01 98.2% 55.3%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.57 49.0 3.65e-01 98.2% 69.7%
3gzsA00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 47.0 2.80e-01 98.2% 23.6%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 48.0 3.89e-01 96.4% 48.6%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 46.0 3.86e-01 96.4% 50.0%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.55 39.0 3.77e-01 89.3% 66.7%
3hx9B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 33.0 2.74e-01 96.4% 34.7%
1zcjA03 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.54 44.0 3.41e-01 96.4% 38.7%
4h0eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 3.59e-01 76.8% 95.7%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 46.0 3.58e-01 100.0% 65.9%
1lkxC03 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.53 43.0 3.68e-01 100.0% 91.6%
3m9zA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.53 38.0 3.18e-01 85.7% 78.2%
6n6qD00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.52 41.0 2.53e-01 96.4% 78.4%
4ft4A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 43.0 2.66e-01 94.6% 85.4%
4eqsA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 39.0 2.88e-01 91.1% 32.2%
3jysA01 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 46.0 3.04e-01 100.0% 60.9%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3722734 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.64 51.0 3.27e-01 91.1% 18.2%
3628738 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.64 55.0 3.78e-01 100.0% 27.3%
3827431 192.17.1.16 alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › PHM7_cyt 0.63 53.0 5.06e-01 96.4% 81.5%
3198044 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.63 51.0 4.39e-01 96.4% 55.8%
3696491 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.61 51.0 3.68e-01 100.0% 58.4%
2725264 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.61 53.0 3.76e-01 100.0% 97.2%
3666801 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.60 49.0 3.49e-01 100.0% 50.7%
4662222 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.60 48.0 3.82e-01 98.2% 42.5%
3605494 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.60 52.0 4.13e-01 98.2% 59.1%
3736485 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.60 51.0 3.78e-01 100.0% 53.1%
3619691 109.4.1.1148 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_NUP160_120_M 0.59 50.0 3.67e-01 98.2% 72.7%
3790375 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.59 49.0 3.89e-01 98.2% 44.0%
3247604 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.57 47.0 3.41e-01 100.0% 96.8%
3184525 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.57 47.0 3.35e-01 100.0% 88.8%
134537 109.4.1.178 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SusD-like 0.57 47.0 2.80e-01 98.2% 23.6%
5000789 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.57 45.0 3.80e-01 98.2% 49.5%
3281879 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.57 47.0 3.25e-01 96.4% 28.3%
3298201 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.56 44.0 4.15e-01 98.2% 71.4%
3359944 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.56 29.0 3.00e-01 96.4% 50.9%
4962836 5001.1.1.292 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM 0.55 45.0 3.05e-01 98.2% 78.4%
4597956 218.3.1.0 a+b two layers › Enolase-N/ribosomal protein › Prokaryotic ribosomal protein L17 › Prokaryotic ribosomal protein L17 0.54 41.0 3.32e-01 85.7% 65.9%
4083451 192.2.1.20 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ASNSD1-SEP 0.54 46.0 4.10e-01 96.4% 68.8%
3595668 2003.1.2.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 0.53 37.0 2.49e-01 73.2% 99.6%
5077402 2007.15.1.0 a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase 0.53 45.0 3.19e-01 100.0% 45.9%
4996951 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.52 43.0 3.75e-01 94.6% 91.1%
4820937 109.4.1.1264 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16 0.52 43.0 2.44e-01 100.0% 13.3%
3406265 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.52 40.0 3.63e-01 92.9% 64.7%
4025655 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 42.0 3.64e-01 98.2% 57.9%
5052532 5063.1.1.0 alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK 0.51 43.0 3.79e-01 100.0% 88.9%
3321176 5051.1.1.6 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans 0.51 38.0 2.34e-01 87.5% 61.6%
3970671 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.51 43.0 3.92e-01 98.2% 70.7%
3669930 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.51 35.0 3.07e-01 89.3% 48.2%