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GQ919031.1__ACX71122.1__pZL12.45c__00045
Bact-VirGQ919031.1__ACX71122.1__pZL12.45c__00045
Identity
- Accession:
- GQ919031 ↗
- Kingdom:
- phage
Quality
65.7
mean pLDDT
Taxonomy
TaxID: 2570911
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 49-119
Domain cluster:
rep: NC_048686.1__YP_009836121.1__HWB41_gp02__00002__D179-248
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.86 | 73.0 | 6.83e-01 | 98.6% | 75.3% |
| 4bolA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.84 | 62.0 | 5.94e-01 | 85.9% | 68.8% |
| 1lbuA01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.82 | 71.0 | 6.72e-01 | 98.6% | 78.6% |
| 6z74C02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.60 | 40.0 | 3.12e-01 | 70.4% | 54.7% |
| 4rflA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.57 | 42.0 | 3.10e-01 | 80.3% | 67.8% |
| 3d8lA00 | 1.10.8.940 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein, phage p2 ORF12 | 0.54 | 37.0 | 3.47e-01 | 73.2% | 78.0% |
| 2e87A01 | 1.20.120.1190 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.54 | 39.0 | 3.04e-01 | 77.5% | 76.9% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 41.0 | 3.45e-01 | 85.9% | 72.9% |
| 2g5gX02 | 1.10.8.760 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Haem-binding uptake, Tiki superfamily, ChaN, domain 2 | 0.52 | 36.0 | 3.90e-01 | 95.8% | 86.4% |
| 4iw9A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 37.0 | 3.29e-01 | 81.7% | 96.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3201809 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.90 | 84.0 | 8.04e-01 | 100.0% | 87.5% |
| 4173379 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.88 | 75.0 | 7.20e-01 | 100.0% | 81.2% |
| 5019285 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.87 | 76.0 | 6.81e-01 | 100.0% | 69.5% |
| 1086899 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.84 | 62.0 | 5.98e-01 | 85.9% | 70.5% |
| 3319740 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.83 | 72.0 | 6.73e-01 | 100.0% | 77.6% |
| 1877329 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.83 | 67.0 | 6.59e-01 | 100.0% | 80.3% |
| 3395 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.82 | 71.0 | 6.75e-01 | 98.6% | 79.5% |
| 4055540 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.81 | 66.0 | 6.68e-01 | 97.2% | 88.4% |
| 3274761 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.81 | 75.0 | 5.58e-01 | 100.0% | 62.4% |
| 4096813 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.79 | 74.0 | 6.47e-01 | 100.0% | 76.0% |
| 3060287 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.78 | 63.0 | 6.20e-01 | 100.0% | 82.7% |
| 3332533 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.77 | 71.0 | 6.27e-01 | 100.0% | 79.0% |
| 1904136 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.76 | 60.0 | 5.91e-01 | 95.8% | 81.3% |
| 4962391 | 144.1.1.11 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_2 | 0.70 | 65.0 | 5.94e-01 | 100.0% | 82.2% |
| 2719399 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.56 | 39.0 | 3.04e-01 | 76.1% | 46.6% |
| 3236758 | 2006.1.1.44 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like | 0.55 | 40.0 | 2.82e-01 | 76.1% | 35.6% |
| 5029314 | 3960.1.1.0 ↗ | alpha arrays › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain | 0.55 | 39.0 | 3.52e-01 | 77.5% | 75.0% |
| 3662616 | 605.1.1.204 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › YGGT | 0.53 | 38.0 | 3.57e-01 | 77.5% | 65.6% |
| 4514389 | 2484.1.1.31 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Glucokinase | 0.52 | 42.0 | 3.13e-01 | 93.0% | 49.8% |
| 4948675 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.52 | 40.0 | 3.28e-01 | 84.5% | 74.3% |