Back to structures

GQ919031.1__ACX71158.1__pZL12.81__00081

Bact-Vir

GQ919031.1__ACX71158.1__pZL12.81__00081

Identity

Accession:
GQ919031 ↗
Kingdom:
phage

Quality

82.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-85
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1f4qA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.72 53.0 4.00e-01 100.0% 33.5%
3nbiA01 1.10.8.1020 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain 0.67 47.0 4.96e-01 98.6% 87.9%
2jnfA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.66 45.0 4.46e-01 100.0% 67.6%
1tuzA00 1.10.238.110 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Diacylglycerol kinase alpha. 0.59 46.0 3.92e-01 100.0% 50.8%
7dklA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 3.84e-01 88.4% 60.0%
1byiA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 42.0 3.03e-01 85.5% 92.4%
3f7cA00 1.20.1590.10 Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like 0.54 38.0 2.81e-01 75.4% 66.3%
3lw7A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 45.0 3.49e-01 97.1% 92.9%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.93e-01 98.6% 68.5%
2btoA01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.51 38.0 2.73e-01 85.5% 86.6%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.51 40.0 3.71e-01 97.1% 67.4%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3291502 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.80 62.0 6.56e-01 100.0% 96.7%
4950846 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 53.0 6.02e-01 100.0% 100.0%
5027627 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.75 53.0 5.77e-01 100.0% 92.7%
4548007 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.75 52.0 4.86e-01 100.0% 58.8%
2876157 101.1.9.105 alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 0.74 50.0 5.56e-01 100.0% 92.5%
4977905 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 47.0 4.76e-01 84.1% 65.7%
4615936 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.70 51.0 4.38e-01 98.6% 48.2%
3528514 219.1.1.81 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY-3_4_CD 0.60 50.0 3.30e-01 98.6% 48.8%
4799690 101.1.2.12 alpha arrays › HTH › HTH › winged helix domain › DEP 0.52 42.0 3.78e-01 88.4% 74.5%
3455640 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.50 39.0 3.68e-01 88.4% 76.7%
4029045 219.1.1.23 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB 0.50 40.0 2.75e-01 91.3% 71.4%