GTP_cyclohydrolase

Euk-Vir

Pandoravirus_salinus

GTP_cyclohydrolase__YP_008436542__Pandoravirus_salinus__1349410

Identity

72.9 mean pLDDT

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

View cluster (5 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 306-443

PDB

Domain cluster: rep: BML_08182015_6_5m_scaffold_18_prodigal-single.1__X__X__00293__D9-115

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01227.28 best	GTP_cyclohydroI	182.5	7.40e-54	99.3%	73.2%

D2 medium residues 50-109

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1q8cA00	1.10.940.10	Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like	0.66	54.0	4.23e-01	93.3%	65.2%
2ib0A01	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.61	43.0	3.27e-01	73.3%	60.7%
1pieA01	3.30.230.10	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 ›	0.57	48.0	3.37e-01	98.3%	72.5%
3bexA01	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.56	47.0	3.66e-01	96.7%	53.7%
3mdmA00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.52	42.0	2.58e-01	95.0%	39.1%
3kzwA02	3.40.630.10	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases	0.51	44.0	2.78e-01	98.3%	28.6%
4xcvA02	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.51	44.0	3.15e-01	100.0%	46.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3295722	7512.1.1.20 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › EryCIII-like_C	0.60	42.0	2.50e-01	75.0%	25.0%
3615696	314.1.1.1 ↗	a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2	0.55	46.0	2.84e-01	96.7%	85.3%

D3 medium residues 253-302

PDB

Domain cluster: rep: GTP_cyclohydrolase__YP_009480731__Pandoravirus_macleodensis__2107707__D238-283