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GU071103.1__ADO99051.1__PSSM7_052__00052

Bact-Vir

GU071103.1__ADO99051.1__PSSM7_052__00052

Identity

Accession:
GU071103 ↗
Kingdom:
phage

Quality

87.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Palaemonvirus› Prochlorococcus_phage_P-SSM7

TaxID: 445688

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-198
PDB
Domain cluster: rep: IMGVR_UViG_3300020359_000115-3300020359-Ga0211610_100031417__D4-167
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vk1A01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.81 40.0 5.39e-01 75.8% 87.3%
2hwjA01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.69 38.0 4.60e-01 71.5% 79.4%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4683061 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.88 45.0 6.42e-01 73.1% 100.0%
4116056 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.85 39.0 5.92e-01 70.4% 98.8%
2841795 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.85 41.0 6.01e-01 71.5% 98.9%
5073612 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.85 48.0 6.41e-01 79.0% 100.0%
2061501 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.81 40.0 5.48e-01 74.2% 89.9%
5083282 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.80 43.0 5.91e-01 74.2% 100.0%
2387795 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.78 38.0 5.53e-01 73.1% 100.0%
4974679 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.75 41.0 5.49e-01 74.7% 96.2%
3602844 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.75 42.0 5.24e-01 72.0% 85.8%
4964030 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.72 41.0 5.08e-01 73.1% 87.5%
3723395 876.1.1.6 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › PF29418 0.69 44.0 5.40e-01 72.6% 99.2%
85732 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.65 40.0 4.91e-01 88.7% 93.4%
5010421 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.63 39.0 4.78e-01 76.3% 92.7%
5055163 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.62 40.0 4.40e-01 90.9% 78.7%
5035573 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.60 37.0 4.70e-01 71.5% 100.0%
4934171 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.58 40.0 4.61e-01 76.3% 92.9%
3279590 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.56 37.0 4.51e-01 74.2% 100.0%
5032574 876.1.1.9 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB 0.56 50.0 4.87e-01 95.2% 89.8%
5031965 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.53 43.0 4.43e-01 83.9% 96.0%
D2 high residues 200-256
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vayA02 1.20.120.1600 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.63 54.0 4.80e-01 100.0% 72.4%
2vlaA01 1.10.10.2080 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 54.0 4.96e-01 100.0% 74.4%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.62 51.0 4.67e-01 94.7% 83.5%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.62 45.0 4.40e-01 100.0% 70.1%
3kbbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.60 45.0 4.34e-01 94.7% 70.0%
2h5nC00 1.10.3680.10 Mainly Alpha › Orthogonal Bundle › TerB-like › TerB-like 0.59 46.0 3.71e-01 100.0% 41.1%
7a0hA01 3.30.1140.60 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit 0.56 44.0 3.59e-01 84.2% 89.1%
6nmnA02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.56 44.0 3.48e-01 89.5% 90.6%
1r4wA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 47.0 3.24e-01 100.0% 28.4%
1pdoA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.54 47.0 3.64e-01 100.0% 69.0%
8hk0A01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.53 42.0 3.52e-01 98.2% 61.3%
4cybD00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.52 41.0 3.04e-01 91.2% 76.0%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.52 43.0 3.45e-01 100.0% 94.0%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.52 42.0 3.32e-01 94.7% 76.7%
1y88A02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.52 39.0 3.88e-01 100.0% 79.7%
1m22A00 3.90.1300.10 Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain 0.52 44.0 2.63e-01 100.0% 55.6%
2c12A01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.51 42.0 3.37e-01 98.2% 55.9%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5010443 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.84 63.0 3.65e-01 100.0% 10.1%
4106041 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.74 50.0 5.45e-01 98.2% 91.1%
4638215 101.35.1.4 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.74 56.0 5.91e-01 100.0% 96.0%
4050022 101.35.1.4 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.71 55.0 5.61e-01 100.0% 90.9%
4073017 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.70 54.0 5.50e-01 98.2% 87.3%
4452388 101.35.1.4 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.69 51.0 5.32e-01 100.0% 94.0%
4093240 101.35.1.4 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.69 54.0 5.48e-01 100.0% 92.7%
4361091 101.35.1.4 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.69 51.0 5.12e-01 100.0% 78.3%
4016998 132.3.1.0 ↗ alpha bundles › ACP-like › Hypothetical protein YjbJ › Hypothetical protein YjbJ 0.69 58.0 5.34e-01 94.7% 76.0%
3940372 2006.1.1.44 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.67 58.0 3.75e-01 100.0% 23.8%
4214506 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.67 53.0 5.39e-01 100.0% 94.5%
3708119 3285.1.1.1 ↗ alpha duplicates or obligate multimers › Alix V domain › Alix V domain › Alix V domain › ALIX_LYPXL_bnd 0.66 46.0 2.78e-01 73.7% 72.2%
3621577 101.1.2.90 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.65 48.0 3.78e-01 100.0% 36.2%
4991411 1075.1.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane 0.64 56.0 3.70e-01 100.0% 38.3%
4021032 4954.1.1.0 ↗ a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit 0.64 53.0 3.77e-01 100.0% 44.0%
4189213 5041.1.1.0 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.64 46.0 4.24e-01 77.2% 72.0%
4956688 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.64 53.0 4.11e-01 98.2% 98.6%
3963650 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.64 43.0 4.55e-01 91.2% 80.0%
1153722 3009.1.1.0 ↗ alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like 0.62 45.0 4.43e-01 94.7% 74.2%
2796737 3009.1.1.0 ↗ alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like 0.61 43.0 4.19e-01 91.2% 64.5%
4010517 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.61 39.0 4.11e-01 98.2% 74.0%
147067 3276.1.1.1 ↗ alpha arrays › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › MogR_DNAbind 0.61 44.0 4.30e-01 98.2% 70.3%
3230723 548.1.1.0 ↗ alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain 0.59 39.0 4.31e-01 71.9% 86.7%
4023387 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.59 40.0 3.37e-01 71.9% 72.0%
4945647 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.59 46.0 3.98e-01 93.0% 54.0%
5048617 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 48.0 4.38e-01 100.0% 70.0%
4028725 102.1.2.23 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › Stevor 0.55 46.0 4.16e-01 94.7% 70.0%
3241028 101.1.2.649 ↗ alpha arrays › HTH › HTH › winged helix domain › PF28730 0.54 42.0 3.79e-01 100.0% 61.2%
3943860 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.53 36.0 3.67e-01 93.0% 76.4%
3947493 601.3.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.52 36.0 3.06e-01 73.7% 67.3%
4855020 1188.1.1.1 ↗ alpha bundles › ZIP zinc transporter › ZIP zinc transporter › ZIP zinc transporter › Zip 0.52 43.0 2.96e-01 94.7% 98.5%
3968859 4198.1.1.3 ↗ alpha arrays › TerB-like › TerB-like › TerB-like › DUF533 0.50 42.0 3.18e-01 100.0% 98.1%
D3 high residues 269-399
PDB
Domain cluster: rep: IMGVR_UViG_3300025590_000015-3300025590-Ga0209195_100023952__D240-368
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jaxA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.68 44.0 4.50e-01 74.8% 67.2%
2ph7A02 3.40.50.10670 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › af2093 domain 0.67 41.0 4.73e-01 80.9% 84.4%
3cisH00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.64 45.0 3.50e-01 77.9% 33.7%
1fzrA00 3.40.91.30 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.63 38.0 3.87e-01 84.7% 60.5%
2o3rA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 48.0 4.98e-01 97.7% 85.5%
2egvA02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.63 39.0 3.66e-01 75.6% 49.7%
1dcfA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 49.0 4.95e-01 100.0% 82.7%
2fgyA03 3.30.1330.140 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Carboxysome Shell Carbonic Anhydrase, C-terminal domain 0.62 48.0 5.01e-01 97.7% 90.6%
3r7wA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 57.0 5.06e-01 99.2% 87.4%
3p26A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 54.0 4.58e-01 99.2% 77.5%
2bgwB01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 49.0 4.95e-01 99.2% 87.0%
3olqA00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 44.0 3.36e-01 77.1% 33.0%
6hcdD00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 40.0 4.05e-01 77.9% 66.7%
1bxkA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 53.0 4.30e-01 100.0% 85.3%
8g3hA01 3.20.20.330 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain 0.59 49.0 3.77e-01 90.8% 75.2%
2ielA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 41.0 4.09e-01 74.8% 69.7%
3bm3A00 3.40.91.80 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.58 53.0 4.22e-01 99.2% 57.9%
4o1eB00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.58 51.0 4.02e-01 94.7% 82.0%
4g4sO01 3.40.50.12120 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › POC1 chaperone 0.58 52.0 4.53e-01 99.2% 74.0%
3oy2A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 45.0 3.72e-01 94.7% 46.1%
5jipA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 48.0 4.05e-01 90.8% 79.7%
4iuyA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 52.0 4.20e-01 100.0% 91.7%
4ee9A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.57 50.0 3.78e-01 95.4% 96.9%
6bs3B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 51.0 3.89e-01 99.2% 93.9%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 37.0 3.75e-01 87.0% 65.1%
3s3tA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 42.0 4.07e-01 83.2% 68.3%
2hrzA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 51.0 4.25e-01 100.0% 84.8%
4g1vA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.56 38.0 3.78e-01 84.7% 65.4%
1mumA00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.56 47.0 3.64e-01 90.1% 55.4%
3idfA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 41.0 4.02e-01 76.3% 71.0%
1to3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 50.0 3.88e-01 97.7% 77.3%
4d8tA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 37.0 4.00e-01 84.0% 78.9%
2z3vA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 39.0 3.89e-01 77.1% 68.6%
1p0kA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 44.0 3.37e-01 83.2% 77.8%
5yycA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.55 48.0 4.10e-01 95.4% 85.2%
3wrwA02 3.40.50.12030 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Uncharacterised protein family UPF0261, NC domain 0.55 49.0 4.16e-01 99.2% 91.8%
3h2sA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 49.0 4.22e-01 100.0% 94.4%
3nntA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 47.0 3.77e-01 92.4% 87.5%
3hgmA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 42.0 4.05e-01 83.2% 71.4%
3fg9C01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 40.0 3.97e-01 76.3% 72.1%
3zbqA00 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.55 49.0 3.76e-01 100.0% 64.4%
3hwwA01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.55 48.0 4.15e-01 96.2% 76.5%
3slrA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.55 48.0 4.12e-01 98.5% 83.9%
7wu1A01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.54 44.0 3.86e-01 87.0% 85.6%
4ei7A02 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.54 48.0 4.03e-01 100.0% 96.2%
3t5tA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.54 40.0 3.57e-01 90.8% 53.7%
4wnyA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 39.0 3.97e-01 79.4% 75.8%
4u3aB00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 48.0 3.72e-01 99.2% 81.6%
1ihuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 47.0 3.87e-01 97.7% 88.6%
1uf3A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.53 47.0 3.99e-01 99.2% 91.6%
6fnuA00 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.53 45.0 3.50e-01 93.9% 87.2%
3a2kA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 39.0 3.95e-01 85.5% 75.6%
4jcqA00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.53 43.0 3.96e-01 86.3% 99.4%
2q0xA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 47.0 3.68e-01 100.0% 84.0%
3ru6B00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 45.0 3.77e-01 94.7% 86.0%
3vk5B00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.52 43.0 3.50e-01 90.1% 75.0%
2x9qB00 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.51 42.0 3.67e-01 93.1% 78.4%
1jqlB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 41.0 4.07e-01 91.6% 80.7%
3i45A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 45.0 4.03e-01 95.4% 76.1%
7wkqB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 44.0 3.88e-01 97.7% 95.6%
2p0oA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 45.0 3.74e-01 97.7% 87.2%
4lgvA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 45.0 4.04e-01 100.0% 91.5%
2amlB01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.51 41.0 3.54e-01 99.2% 54.5%
3lqkA00 3.40.50.1950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like 0.50 46.0 4.02e-01 100.0% 91.2%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4986847 2008.5.1.1 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Uncharacterized protein AF_2093 C-terminal domain › Uncharacterized protein AF_2093 C-terminal domain › DUF6834_C 0.69 54.0 5.34e-01 100.0% 77.1%
3724621 2005.1.1.67 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF28717 0.68 52.0 4.61e-01 79.4% 69.2%
3736568 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.67 58.0 5.49e-01 100.0% 79.4%
4962915 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.66 40.0 4.24e-01 75.6% 65.8%
3701997 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 60.0 5.04e-01 99.2% 85.6%
5037144 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.65 51.0 5.26e-01 100.0% 87.9%
4127413 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.65 47.0 5.18e-01 100.0% 95.2%
4971490 2008.4.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like 0.64 49.0 5.33e-01 100.0% 96.4%
5049255 2004.1.1.16 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.64 57.0 5.14e-01 99.2% 85.9%
3192519 7531.1.1.0 ↗ a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like 0.64 48.0 3.49e-01 77.9% 44.1%
4954578 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.63 43.0 4.25e-01 80.2% 65.0%
3951210 2003.1.1.88 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › OpcA_G6PD_assem 0.63 39.0 4.09e-01 79.4% 68.7%
4647631 2004.1.1.16 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.63 57.0 5.04e-01 100.0% 83.7%
3790157 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.63 56.0 4.69e-01 100.0% 89.8%
3288720 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.63 44.0 4.33e-01 75.6% 67.1%
5046259 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.63 48.0 5.13e-01 100.0% 95.5%
5039083 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.63 39.0 4.01e-01 78.6% 64.8%
4931388 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.62 43.0 4.11e-01 86.3% 62.0%
None — 0.61 45.0 2.85e-01 76.3% 38.7%
5005020 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.61 41.0 4.04e-01 75.6% 63.6%
4985079 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.61 41.0 4.09e-01 77.1% 65.9%
4299491 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.60 45.0 4.34e-01 77.9% 68.0%
4946873 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 54.0 4.98e-01 99.2% 90.9%
2391911 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.60 40.0 4.05e-01 77.9% 66.7%
3487369 7529.1.1.11 ↗ a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › DUF2362 0.59 53.0 4.47e-01 100.0% 79.6%
3181438 7590.1.1.7 ↗ a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › MID_MedPIWI 0.59 54.0 4.53e-01 100.0% 72.0%
4009199 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.59 42.0 4.17e-01 83.2% 69.3%
3930769 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.59 53.0 4.35e-01 100.0% 81.7%
4928866 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.58 41.0 4.18e-01 77.9% 73.1%
4657894 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.58 41.0 4.04e-01 77.9% 67.9%
5048111 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.58 42.0 4.07e-01 83.2% 66.4%
3964625 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.58 44.0 4.25e-01 83.2% 70.0%
4988581 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.57 41.0 4.08e-01 75.6% 71.1%
3839224 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.57 41.0 4.12e-01 75.6% 71.9%
4525117 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.57 42.0 4.09e-01 83.2% 69.2%
3968073 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.57 41.0 4.00e-01 83.2% 66.9%
4989007 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.57 42.0 4.09e-01 77.9% 69.0%
143501 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.57 42.0 4.07e-01 83.2% 68.3%
2709894 2002.1.1.134 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.57 50.0 3.73e-01 98.5% 79.1%
3320834 2005.1.1.41 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C 0.57 38.0 3.61e-01 77.1% 55.5%
5071204 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.56 42.0 4.10e-01 84.0% 69.7%
4010166 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.56 39.0 3.76e-01 90.1% 62.8%
135916 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.56 41.0 4.02e-01 76.3% 71.0%
4957971 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.56 39.0 3.88e-01 83.2% 68.1%
3664522 2003.1.5.31 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS 0.56 45.0 3.14e-01 86.3% 26.4%
3889173 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 46.0 4.59e-01 100.0% 84.3%
4961978 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.56 39.0 3.91e-01 77.1% 69.6%
5059591 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.56 39.0 3.83e-01 77.1% 66.4%
4963304 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.56 41.0 4.03e-01 78.6% 70.7%
3970285 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.56 50.0 4.46e-01 99.2% 93.7%
3596601 2003.1.6.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like 0.56 50.0 3.92e-01 99.2% 92.9%
5074975 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.56 41.0 4.00e-01 83.2% 69.9%
3958881 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.55 40.0 3.94e-01 83.2% 68.3%
5025252 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.55 40.0 3.96e-01 77.1% 70.0%
3308798 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.55 41.0 3.91e-01 77.9% 65.8%
3797861 7516.1.1.37 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CHGN 0.55 40.0 3.08e-01 80.2% 32.3%
5070450 2002.1.1.13 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.55 48.0 3.58e-01 94.7% 79.1%
5075603 2007.3.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.55 49.0 4.45e-01 99.2% 82.8%
3948368 7574.1.1.1 ↗ a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Transketolase_N 0.54 47.0 3.72e-01 95.4% 72.9%
4012695 300.1.1.0 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.54 49.0 3.32e-01 100.0% 63.0%
3330674 2005.1.1.41 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C 0.54 39.0 3.70e-01 87.8% 61.9%
4276737 7531.1.1.0 ↗ a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like 0.54 48.0 3.68e-01 100.0% 83.4%
2469825 2007.3.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA 0.54 48.0 4.14e-01 100.0% 67.8%
4113556 7574.1.1.0 ↗ a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) 0.54 48.0 4.29e-01 100.0% 82.6%
3603346 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.54 38.0 3.64e-01 76.3% 60.6%
3727746 7514.1.1.0 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain 0.53 43.0 3.73e-01 89.3% 55.1%
3970037 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.53 44.0 3.45e-01 90.8% 82.7%
4999875 2007.3.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA 0.52 47.0 4.25e-01 100.0% 75.0%
4455442 2004.1.1.415 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, RuvB_N 0.52 46.0 3.93e-01 99.2% 90.9%
3434843 2005.1.1.78 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd, CHX17_C 0.51 41.0 3.13e-01 88.5% 37.9%
4373333 2002.1.1.136 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF692 0.51 44.0 3.48e-01 94.7% 81.1%
5018429 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 45.0 3.86e-01 96.2% 95.2%
4937668 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.51 43.0 3.83e-01 95.4% 63.2%
3320604 2005.1.1.43 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd 0.51 42.0 3.79e-01 88.5% 66.1%
3229383 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.51 44.0 3.53e-01 97.7% 63.6%
3469356 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.50 46.0 4.25e-01 100.0% 90.3%
3197812 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 45.0 4.07e-01 99.2% 81.7%