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GU296433.1__AEA86370.1__X__00022
Bact-VirGU296433.1__AEA86370.1__X__00022
Identity
- Accession:
- GU296433 ↗
- Kingdom:
- phage
Quality
68.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Connertonviridae›
Fletchervirus›
Campylobacter_phage_NCTC12673
TaxID: 2885915
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 30-64
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7f0uA01 | 1.10.8.1190 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Papain-like viral protease, thumb domain | 0.66 | 44.0 | 3.26e-01 | 100.0% | 25.3% |
| 2qr4A02 | 1.10.287.830 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › putative peptidase helix hairpin domain like | 0.65 | 50.0 | 4.83e-01 | 100.0% | 85.1% |
| 2a90A02 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.63 | 40.0 | 3.25e-01 | 91.4% | 37.7% |
| 4g6tB00 | 6.10.20.120 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.60 | 41.0 | 3.50e-01 | 82.9% | 38.0% |
| 4cvnA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 49.0 | 3.15e-01 | 100.0% | 59.8% |
| 3n4dA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.58 | 50.0 | 3.31e-01 | 100.0% | 75.0% |
| 2xguB00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.57 | 44.0 | 3.14e-01 | 100.0% | 32.8% |
| 4ottA02 | 1.10.246.130 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain | 0.56 | 42.0 | 3.03e-01 | 88.6% | 65.3% |
| 1s7mA03 | 2.20.25.140 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.55 | 30.0 | 3.13e-01 | 100.0% | 57.1% |
| 5ucoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.53 | 36.0 | 2.60e-01 | 88.6% | 34.6% |
| 17gsA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 38.0 | 2.75e-01 | 85.7% | 28.3% |
| 6n59A02 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 34.0 | 2.60e-01 | 100.0% | 28.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3345562 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.57 | 42.0 | 2.61e-01 | 94.3% | 17.6% |
| 5020070 | 2003.2.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 | 0.57 | 48.0 | 2.91e-01 | 100.0% | 41.9% |
| 3356078 | 109.4.1.933 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Trm732 | 0.56 | 43.0 | 2.67e-01 | 97.1% | 33.1% |
| 4968841 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 46.0 | 2.75e-01 | 100.0% | 12.0% |
| 3174664 | 4156.1.1.1 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 | 0.53 | 38.0 | 2.65e-01 | 94.3% | 35.9% |
| 4992139 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.51 | 38.0 | 2.84e-01 | 91.4% | 55.7% |
| 3791559 | 363.1.1.1 ↗ | few secondary structure elements › Thyroglobulin type-1 domain › Thyroglobulin type-1 domain › Thyroglobulin type-1 domain › Thyroglobulin_1 | 0.50 | 34.0 | 2.67e-01 | 71.4% | 90.0% |