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GU323708.1__ADA79899.1__CU5_19__00019
Bact-VirGU323708.1__ADA79899.1__CU5_19__00019
Identity
- Accession:
- GU323708 ↗
- Kingdom:
- phage
Quality
92.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-72
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.72 | 64.0 | 5.46e-01 | 100.0% | 79.7% |
| 1fs0G02 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.72 | 49.0 | 4.59e-01 | 70.8% | 94.4% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.69 | 47.0 | 4.67e-01 | 70.8% | 91.9% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.68 | 53.0 | 4.72e-01 | 86.1% | 98.1% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.66 | 45.0 | 4.65e-01 | 70.8% | 83.8% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.66 | 46.0 | 3.99e-01 | 73.6% | 52.7% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.66 | 44.0 | 4.00e-01 | 70.8% | 71.0% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 46.0 | 3.62e-01 | 73.6% | 55.1% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.63 | 44.0 | 4.49e-01 | 72.2% | 100.0% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 43.0 | 4.63e-01 | 70.8% | 100.0% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.61 | 47.0 | 3.94e-01 | 86.1% | 63.9% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.61 | 43.0 | 4.24e-01 | 75.0% | 98.7% |
| 1tf5A04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.60 | 50.0 | 3.86e-01 | 97.2% | 95.6% |
| 1v4aA03 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.60 | 51.0 | 4.12e-01 | 100.0% | 81.0% |
| 2ipcA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.58 | 50.0 | 3.58e-01 | 100.0% | 73.1% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.58 | 48.0 | 4.42e-01 | 88.9% | 69.2% |
| 1e6dM01 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.57 | 43.0 | 3.41e-01 | 79.2% | 76.2% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 42.0 | 3.50e-01 | 100.0% | 45.5% |
| 1wleA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.56 | 44.0 | 3.90e-01 | 88.9% | 98.2% |
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 50.0 | 4.36e-01 | 100.0% | 86.9% |
| 3vouB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 41.0 | 3.41e-01 | 80.6% | 67.6% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.54 | 46.0 | 3.98e-01 | 95.8% | 95.6% |
| 1kxpD02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.54 | 46.0 | 4.39e-01 | 100.0% | 88.6% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 49.0 | 3.92e-01 | 100.0% | 55.0% |
| 3spcA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 45.0 | 3.72e-01 | 97.2% | 52.0% |
| 2hxiB02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 44.0 | 3.67e-01 | 94.4% | 89.6% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.52 | 45.0 | 4.52e-01 | 97.2% | 98.6% |
| 2b4oA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.52 | 44.0 | 3.11e-01 | 93.1% | 80.6% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3669274 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.73 | 62.0 | 4.98e-01 | 94.4% | 56.4% |
| 3511563 | 192.29.1.143 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › CCDC28 | 0.73 | 64.0 | 5.67e-01 | 100.0% | 95.2% |
| 3299515 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.70 | 59.0 | 4.72e-01 | 95.8% | 53.3% |
| 4291442 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.70 | 61.0 | 4.27e-01 | 100.0% | 86.3% |
| 5056868 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.68 | 51.0 | 3.13e-01 | 77.8% | 28.2% |
| 3672316 | 611.8.1.0 ↗ | alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 | 0.68 | 58.0 | 4.39e-01 | 98.6% | 62.2% |
| 3412603 | 3567.1.1.154 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › PF30089 | 0.67 | 57.0 | 4.91e-01 | 100.0% | 76.8% |
| 3577241 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.67 | 48.0 | 4.03e-01 | 75.0% | 70.0% |
| 3876207 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.67 | 54.0 | 4.01e-01 | 87.5% | 81.7% |
| 5047150 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.66 | 45.0 | 3.25e-01 | 70.8% | 94.0% |
| 3601647 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 45.0 | 2.65e-01 | 70.8% | 11.8% |
| 3957435 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.65 | 45.0 | 3.81e-01 | 72.2% | 66.7% |
| 4024074 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.64 | 56.0 | 4.28e-01 | 100.0% | 71.4% |
| 3550496 | 4970.1.1.4 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › RPOL_N | 0.64 | 45.0 | 3.32e-01 | 73.6% | 30.5% |
| 3192264 | 7076.1.1.0 ↗ | 0.62 | 53.0 | 4.76e-01 | 94.4% | 87.0% | |
| 3408277 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.61 | 51.0 | 4.34e-01 | 90.3% | 99.1% |
| 3900656 | 3831.1.1.6 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › POF1B_HlH | 0.58 | 51.0 | 4.90e-01 | 100.0% | 92.9% |
| 3502594 | 603.1.1.98 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE, Syntaxin_2 | 0.57 | 51.0 | 3.58e-01 | 100.0% | 63.2% |
| 3631951 | 3755.3.1.355 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Uds1 | 0.57 | 42.0 | 3.33e-01 | 76.4% | 81.4% |
| 3881428 | 3835.1.1.1 ↗ | alpha bundles › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein › PLC-beta_C | 0.57 | 46.0 | 3.31e-01 | 86.1% | 69.5% |
| 5081054 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.56 | 45.0 | 3.45e-01 | 86.1% | 55.6% |
| 3793578 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.56 | 49.0 | 4.31e-01 | 100.0% | 99.1% |
| 3594068 | 3959.1.1.0 ↗ | alpha duplicates or obligate multimers › Protein Hikeshi dimerization domain › Protein Hikeshi dimerization domain › Protein Hikeshi dimerization domain | 0.54 | 40.0 | 3.94e-01 | 80.6% | 88.7% |
| 4954446 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.52 | 46.0 | 4.54e-01 | 98.6% | 96.0% |
| 3921008 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.51 | 43.0 | 3.27e-01 | 88.9% | 61.9% |
| 4163138 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.51 | 41.0 | 4.31e-01 | 87.5% | 100.0% |
| 3423639 | 216.1.1.1 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con | 0.51 | 45.0 | 3.04e-01 | 100.0% | 33.8% |
| 3707306 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.50 | 45.0 | 3.90e-01 | 100.0% | 92.7% |