←Back to structures
GU459069.1__ADQ53203.1__65p195__00194
Bact-VirGU459069.1__ADQ53203.1__65p195__00194
Identity
- Accession:
- GU459069 ↗
- Kingdom:
- phage
Quality
79.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Ishigurovirus›
Aeromonas_phage_65
TaxID: 2919549
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-63
Domain cluster:
representative
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.89 | 81.0 | 5.60e-01 | 100.0% | 32.8% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.88 | 67.0 | 6.73e-01 | 79.0% | 90.3% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.88 | 74.0 | 6.86e-01 | 95.2% | 72.4% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.86 | 80.0 | 6.62e-01 | 100.0% | 61.8% |
| 1rq0A01 | 6.10.140.160 | Special › Helix non-globular › Helix Hairpins › | 0.85 | 79.0 | 7.09e-01 | 100.0% | 74.7% |
| 3nyjA00 | 1.20.120.770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain | 0.85 | 77.0 | 5.41e-01 | 100.0% | 42.5% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.83 | 71.0 | 5.34e-01 | 96.8% | 40.4% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.83 | 66.0 | 5.24e-01 | 87.1% | 44.2% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.82 | 69.0 | 6.76e-01 | 93.5% | 85.1% |
| 2fb5A01 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.82 | 74.0 | 7.00e-01 | 100.0% | 84.7% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.82 | 61.0 | 6.77e-01 | 79.0% | 100.0% |
| 2h7oA02 | 1.20.58.1230 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Rac1-binding domain, C-terminal subdomain | 0.80 | 66.0 | 4.94e-01 | 90.3% | 70.7% |
| 4ke2A00 | 6.10.140.1860 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 71.0 | 4.94e-01 | 100.0% | 34.2% |
| 3fmcC01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.79 | 56.0 | 3.51e-01 | 79.0% | 15.9% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 68.0 | 5.54e-01 | 100.0% | 51.7% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.78 | 70.0 | 6.43e-01 | 100.0% | 79.7% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.78 | 62.0 | 5.61e-01 | 90.3% | 63.5% |
| 2cazC00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.77 | 67.0 | 6.64e-01 | 100.0% | 92.2% |
| 2rkkA01 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.76 | 63.0 | 4.59e-01 | 88.7% | 35.3% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.76 | 59.0 | 5.27e-01 | 83.9% | 60.0% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.76 | 63.0 | 5.83e-01 | 90.3% | 71.8% |
| 2pg0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.75 | 67.0 | 5.01e-01 | 100.0% | 41.6% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 55.0 | 5.16e-01 | 79.0% | 64.5% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 60.0 | 5.24e-01 | 93.5% | 58.2% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.73 | 63.0 | 5.59e-01 | 100.0% | 90.4% |
| 4hkaA01 | 1.20.58.480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 62.0 | 4.03e-01 | 96.8% | 20.4% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.73 | 64.0 | 4.97e-01 | 98.4% | 45.9% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.72 | 61.0 | 4.92e-01 | 91.9% | 56.4% |
| 1b06A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.72 | 61.0 | 5.94e-01 | 91.9% | 92.5% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.71 | 59.0 | 6.00e-01 | 100.0% | 93.4% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 62.0 | 5.21e-01 | 100.0% | 60.4% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 59.0 | 5.25e-01 | 100.0% | 80.2% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 55.0 | 5.47e-01 | 100.0% | 83.1% |
| 5tprA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.69 | 49.0 | 3.35e-01 | 74.2% | 23.6% |
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.69 | 51.0 | 4.37e-01 | 85.5% | 47.2% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 59.0 | 5.59e-01 | 100.0% | 82.7% |
| 1fafA00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.69 | 49.0 | 4.60e-01 | 77.4% | 60.8% |
| 3gnlB02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 51.0 | 5.05e-01 | 91.9% | 76.5% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.67 | 54.0 | 5.32e-01 | 96.8% | 86.6% |
| 2kwhA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 49.0 | 5.07e-01 | 85.5% | 92.9% |
| 2uuiA00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.66 | 55.0 | 4.20e-01 | 98.4% | 39.4% |
| 3i2fA02 | 1.10.3020.10 | Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) | 0.64 | 46.0 | 4.03e-01 | 87.1% | 50.5% |
| 2db7A01 | 6.10.250.980 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 48.0 | 5.08e-01 | 95.2% | 100.0% |
| 1lujB01 | 1.10.10.490 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Beta-catenin-interacting ICAT | 0.63 | 39.0 | 4.25e-01 | 74.2% | 73.6% |
| 7dukB01 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.63 | 44.0 | 5.01e-01 | 80.6% | 100.0% |
| 3hdeC00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.56 | 43.0 | 3.28e-01 | 87.1% | 92.1% |
| 1xjuA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.56 | 39.0 | 3.01e-01 | 74.2% | 95.5% |
| 1uajA02 | 1.10.1270.20 | Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2 | 0.55 | 36.0 | 3.46e-01 | 71.0% | 57.5% |
| 1hwyA01 | 1.10.287.140 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 36.0 | 3.86e-01 | 75.8% | 96.1% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3682710 | 2004.1.1.529 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, DUF6469 | 0.89 | 83.0 | 4.80e-01 | 100.0% | 14.2% |
| 3224003 | 9001.1.1.3 ↗ | alpha bundles › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMPIT | 0.88 | 77.0 | 7.05e-01 | 100.0% | 73.8% |
| 3618 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.85 | 79.0 | 7.12e-01 | 100.0% | 75.6% |
| 4034201 | 192.7.1.1 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB | 0.85 | 65.0 | 6.62e-01 | 80.6% | 90.0% |
| 5039649 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.84 | 77.0 | 6.12e-01 | 100.0% | 60.8% |
| 3386373 | 605.1.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim | 0.84 | 68.0 | 6.76e-01 | 100.0% | 84.6% |
| 3838316 | 3567.1.1.150 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › H-kinase_dim | 0.84 | 68.0 | 6.41e-01 | 100.0% | 73.3% |
| 3702706 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.83 | 77.0 | 6.98e-01 | 100.0% | 87.5% |
| 3679373 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.83 | 70.0 | 6.91e-01 | 90.3% | 86.2% |
| 3449084 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.83 | 76.0 | 6.29e-01 | 100.0% | 62.9% |
| 4014175 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.82 | 68.0 | 5.54e-01 | 88.7% | 50.9% |
| 3359325 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.82 | 64.0 | 5.04e-01 | 88.7% | 41.6% |
| 3685493 | 605.2.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › DUF7785 | 0.82 | 67.0 | 5.96e-01 | 91.9% | 63.5% |
| 3608012 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.82 | 72.0 | 6.41e-01 | 95.2% | 75.3% |
| 3195418 | 192.8.1.376 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › RRP36 | 0.82 | 75.0 | 6.39e-01 | 100.0% | 69.5% |
| 3906467 | 1008.1.1.106 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › CSN5_C | 0.81 | 69.0 | 6.05e-01 | 100.0% | 63.3% |
| 3607086 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.81 | 72.0 | 6.57e-01 | 96.8% | 81.2% |
| 4986986 | 3633.1.1.0 ↗ | alpha duplicates or obligate multimers › Haptoglobin-hemoglobin receptor › Haptoglobin-hemoglobin receptor › Haptoglobin-hemoglobin receptor | 0.81 | 73.0 | 4.98e-01 | 100.0% | 58.0% |
| 3616328 | 3826.1.1.41 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › TMEM151 | 0.81 | 65.0 | 5.43e-01 | 90.3% | 53.0% |
| 3756047 | 192.29.1.243 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Fy-3 | 0.80 | 70.0 | 6.11e-01 | 100.0% | 65.6% |
| 5052725 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.79 | 65.0 | 6.25e-01 | 88.7% | 78.6% |
| 4646268 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.79 | 70.0 | 6.71e-01 | 98.4% | 85.7% |
| 3927597 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.77 | 65.0 | 5.27e-01 | 100.0% | 49.2% |
| 3842813 | 4177.1.1.140 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › DUF4456 | 0.77 | 69.0 | 4.81e-01 | 100.0% | 31.8% |
| 3589236 | 3291.1.1.142 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › DUF7649 | 0.76 | 57.0 | 4.91e-01 | 85.5% | 52.6% |
| 3309441 | 547.1.1.0 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain | 0.74 | 61.0 | 5.40e-01 | 91.9% | 62.2% |
| 3972992 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.74 | 59.0 | 5.85e-01 | 91.9% | 84.6% |
| 3607008 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.74 | 64.0 | 5.61e-01 | 100.0% | 67.4% |
| 4890998 | 148.1.3.28 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_11 | 0.74 | 63.0 | 4.07e-01 | 100.0% | 22.1% |
| 1144728 | 604.12.1.2 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 | 0.72 | 58.0 | 5.09e-01 | 88.7% | 58.5% |
| 4961961 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.72 | 58.0 | 5.48e-01 | 90.3% | 76.0% |
| 5044375 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.71 | 59.0 | 4.01e-01 | 98.4% | 25.1% |
| 3926651 | 3948.1.1.0 ↗ | alpha bundles › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain | 0.70 | 52.0 | 4.00e-01 | 96.8% | 36.3% |
| 3545387 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.68 | 56.0 | 4.82e-01 | 100.0% | 55.5% |