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GU459069.1__ADQ53438.1__65p432__00430
Bact-VirGU459069.1__ADQ53438.1__65p432__00430
Identity
- Accession:
- GU459069 ↗
- Kingdom:
- phage
Quality
77.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Ishigurovirus›
Aeromonas_phage_65
TaxID: 2919549
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-43
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m7nA03 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.73 | 50.0 | 5.33e-01 | 83.7% | 91.2% |
| 2nutA02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.70 | 58.0 | 5.21e-01 | 95.3% | 70.5% |
| 2aklA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.67 | 50.0 | 5.02e-01 | 90.7% | 81.4% |
| 2nutB02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.65 | 55.0 | 4.95e-01 | 97.7% | 69.4% |
| 1ae9A00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.65 | 54.0 | 3.69e-01 | 100.0% | 30.4% |
| 2kxpA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.65 | 52.0 | 4.03e-01 | 95.3% | 74.8% |
| 1ej6A04 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 44.0 | 2.78e-01 | 81.4% | 69.6% |
| 7sz2A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.59 | 45.0 | 3.62e-01 | 88.4% | 64.1% |
| 2luyA01 | 3.30.60.210 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Stc1 domain | 0.57 | 39.0 | 3.64e-01 | 74.4% | 82.5% |
| 3goxA02 | 3.30.60.130 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.54 | 38.0 | 3.71e-01 | 83.7% | 87.0% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.54 | 40.0 | 3.87e-01 | 88.4% | 88.2% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3180823 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.88 | 70.0 | 6.22e-01 | 86.0% | 63.3% |
| 3728776 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.88 | 78.0 | 6.47e-01 | 95.3% | 62.9% |
| 3235789 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.81 | 68.0 | 6.29e-01 | 93.0% | 74.5% |
| 5043237 | 375.1.1.93 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › A2L_zn_ribbon | 0.78 | 52.0 | 5.51e-01 | 76.7% | 100.0% |
| 3686965 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.74 | 60.0 | 5.65e-01 | 95.3% | 81.8% |
| 4002266 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.73 | 61.0 | 5.52e-01 | 95.3% | 71.7% |
| 3597501 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 61.0 | 5.14e-01 | 93.0% | 61.4% |
| 3246405 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.72 | 58.0 | 4.24e-01 | 90.7% | 35.0% |
| 3177549 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.72 | 59.0 | 5.27e-01 | 90.7% | 65.0% |
| 4374415 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.72 | 59.0 | 4.92e-01 | 93.0% | 54.7% |
| 4929702 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 53.0 | 5.08e-01 | 88.4% | 72.0% |
| 3987904 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.70 | 53.0 | 5.50e-01 | 86.0% | 97.5% |
| 3708692 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.70 | 56.0 | 3.75e-01 | 90.7% | 22.9% |
| 3402788 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.70 | 59.0 | 4.83e-01 | 100.0% | 52.9% |
| 3707626 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.70 | 57.0 | 4.91e-01 | 93.0% | 61.4% |
| 3784092 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.70 | 55.0 | 4.66e-01 | 93.0% | 52.0% |
| 3995904 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.69 | 55.0 | 4.35e-01 | 90.7% | 46.2% |
| 3258369 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 53.0 | 5.50e-01 | 88.4% | 100.0% |
| 4011521 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 56.0 | 4.76e-01 | 95.3% | 57.3% |
| 3303403 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.68 | 55.0 | 3.98e-01 | 93.0% | 34.6% |
| 3173243 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.68 | 59.0 | 4.85e-01 | 100.0% | 57.5% |
| 3925225 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 49.0 | 5.26e-01 | 79.1% | 97.1% |
| 3922513 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 49.0 | 5.09e-01 | 81.4% | 100.0% |
| 3792293 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.67 | 54.0 | 4.40e-01 | 90.7% | 45.9% |
| 3784201 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.67 | 56.0 | 4.33e-01 | 97.7% | 56.0% |
| 3164762 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 48.0 | 5.00e-01 | 81.4% | 87.5% |
| 3230468 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 53.0 | 4.73e-01 | 100.0% | 83.8% |
| 3436608 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 52.0 | 5.13e-01 | 88.4% | 86.7% |
| 4946886 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 51.0 | 4.98e-01 | 95.3% | 88.0% |
| 4056467 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 47.0 | 4.37e-01 | 95.3% | 61.7% |
| 3575470 | 260.1.1.0 ↗ | a+b duplicates or obligate multimers › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat | 0.62 | 48.0 | 3.27e-01 | 88.4% | 26.7% |
| 3936917 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.61 | 44.0 | 4.63e-01 | 83.7% | 97.1% |
| 3600671 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 50.0 | 4.07e-01 | 97.7% | 51.1% |
| 4935800 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.59 | 48.0 | 3.82e-01 | 97.7% | 94.0% |
| 3830317 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.56 | 34.0 | 3.36e-01 | 88.4% | 46.7% |
| 4997007 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.55 | 41.0 | 3.60e-01 | 86.0% | 72.9% |
| 3635499 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 40.0 | 3.84e-01 | 88.4% | 98.2% |