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GU580940.1__ADD80845.1__ReqiDocB7gene059__00059

Bact-Vir

GU580940.1__ADD80845.1__ReqiDocB7gene059__00059

Identity

Accession:
GU580940 ↗
Kingdom:
phage

Quality

91.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhodococcus_phage_ReqiDocB7

TaxID: 691966

Cluster

View cluster (10 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-157
PDB
Domain cluster: rep: CAKLQF020000001.1__CAH1070266.1__SAMEA5780031_00360__00352__D220-408
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00589.28 best Phage_integrase 100.4 1.40e-28 96.8% 92.4%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.87 75.0 7.16e-01 88.4% 92.5%
2a3vA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.87 74.0 6.56e-01 88.4% 88.6%
3nkhA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.86 73.0 6.33e-01 87.7% 82.8%
4a8eA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.86 82.0 7.73e-01 100.0% 89.9%
1ae9A00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.78 71.0 6.85e-01 96.1% 95.9%
3uxuA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.76 69.0 6.83e-01 100.0% 92.5%
3sqiA02 1.10.443.20 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Centromere DNA-binding protein complex CBF3 subunit, domain 2 0.68 64.0 5.11e-01 100.0% 67.0%
2wfwB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 25.0 3.63e-01 99.4% 89.6%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 27.0 3.58e-01 100.0% 85.0%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4181053 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.92 79.0 7.14e-01 88.4% 82.0%
4994277 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 78.0 7.34e-01 88.4% 82.8%
4637388 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 78.0 7.50e-01 88.4% 80.6%
4940211 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 77.0 7.48e-01 88.4% 88.8%
5002702 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 77.0 7.12e-01 89.0% 79.5%
5059725 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 77.0 7.22e-01 88.4% 81.7%
4965640 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 84.0 7.23e-01 100.0% 93.0%
4973226 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 62.0 7.01e-01 71.0% 95.0%
4981966 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 76.0 6.82e-01 88.4% 80.0%
5016957 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 75.0 7.15e-01 88.4% 93.7%
5083506 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 75.0 6.98e-01 88.4% 84.3%
5000880 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 76.0 7.13e-01 89.0% 81.1%
4392937 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.87 75.0 7.52e-01 88.4% 89.7%
4966027 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 75.0 6.98e-01 88.4% 81.0%
4992939 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 83.0 8.02e-01 100.0% 97.1%
5061203 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 74.0 6.88e-01 89.0% 80.5%
4183457 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 74.0 7.68e-01 88.4% 94.5%
4380833 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 73.0 7.19e-01 88.4% 86.7%
4999472 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 81.0 7.50e-01 100.0% 97.4%
4964228 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 59.0 6.29e-01 70.3% 88.9%
5008693 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.84 80.0 7.10e-01 100.0% 91.9%
4999495 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 78.0 7.40e-01 100.0% 95.6%
3964171 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 70.0 6.76e-01 88.4% 85.1%
5076857 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 77.0 7.37e-01 98.7% 97.1%
3964657 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 68.0 6.21e-01 87.7% 83.6%
5041911 101.1.8.8 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integr_3 0.78 72.0 7.07e-01 100.0% 91.5%
4928148 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.78 67.0 6.51e-01 89.0% 86.9%
150341 101.1.8.8 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integr_3 0.77 69.0 6.84e-01 100.0% 91.9%
5012504 101.1.8.8 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integr_3 0.77 72.0 6.82e-01 100.0% 92.2%
4961917 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.74 71.0 6.56e-01 100.0% 93.2%
3920379 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.72 67.0 6.01e-01 100.0% 91.0%