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GU580940.1__ADD80851.1__ReqiDocB7gene065__00065
Bact-VirGU580940.1__ADD80851.1__ReqiDocB7gene065__00065
Identity
- Accession:
- GU580940 ↗
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-55
Domain cluster:
rep: KR011062.1__AKJ71756.1__TIN2_66__00066__D6-53
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.69 | 46.0 | 4.03e-01 | 98.0% | 46.1% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 45.0 | 4.21e-01 | 70.0% | 64.5% |
| 2cg7A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.62 | 41.0 | 4.27e-01 | 100.0% | 73.9% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 44.0 | 3.85e-01 | 100.0% | 52.0% |
| 1txqA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.60 | 42.0 | 3.79e-01 | 92.0% | 51.4% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 47.0 | 3.44e-01 | 98.0% | 32.3% |
| 2ktyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 46.0 | 3.38e-01 | 98.0% | 31.3% |
| 3qokA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.60 | 38.0 | 3.12e-01 | 72.0% | 34.0% |
| 4b6mB00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.58 | 41.0 | 3.58e-01 | 98.0% | 48.1% |
| 1m4zA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.57 | 44.0 | 3.01e-01 | 100.0% | 22.4% |
| 3p26B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 45.0 | 3.68e-01 | 98.0% | 80.2% |
| 6dddH00 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.52 | 39.0 | 3.34e-01 | 100.0% | 47.3% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 36.0 | 3.45e-01 | 80.0% | 62.9% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.51 | 36.0 | 2.56e-01 | 78.0% | 84.7% |
| 2yweA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 42.0 | 3.46e-01 | 100.0% | 77.0% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.50 | 36.0 | 3.40e-01 | 90.0% | 60.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4982958 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.71 | 49.0 | 3.96e-01 | 74.0% | 41.0% |
| 3575262 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.69 | 46.0 | 2.77e-01 | 98.0% | 10.1% |
| 3589736 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 46.0 | 4.20e-01 | 70.0% | 52.9% |
| 5048008 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.68 | 48.0 | 3.35e-01 | 76.0% | 60.6% |
| 3768116 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.64 | 49.0 | 3.23e-01 | 100.0% | 19.5% |
| 3553413 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.64 | 50.0 | 4.16e-01 | 100.0% | 49.4% |
| 4977206 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 44.0 | 4.21e-01 | 98.0% | 63.3% |
| 3730089 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.62 | 37.0 | 3.74e-01 | 70.0% | 57.1% |
| 3950185 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.61 | 42.0 | 3.48e-01 | 98.0% | 40.0% |
| 3923769 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.61 | 51.0 | 4.36e-01 | 100.0% | 57.5% |
| 3776456 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.60 | 42.0 | 3.64e-01 | 76.0% | 88.1% |
| 3177693 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.60 | 48.0 | 2.86e-01 | 100.0% | 12.1% |
| 3470175 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.57 | 42.0 | 3.63e-01 | 100.0% | 50.0% |
| 1175108 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.57 | 40.0 | 3.16e-01 | 100.0% | 33.9% |
| 3327738 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 37.0 | 2.49e-01 | 98.0% | 17.0% |
| 4477952 | 2004.1.1.63 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › FtsK_SpoIIIE | 0.57 | 37.0 | 2.34e-01 | 70.0% | 12.1% |
| 3585671 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.56 | 40.0 | 4.05e-01 | 98.0% | 78.0% |
| 4197235 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.55 | 44.0 | 3.57e-01 | 100.0% | 46.3% |
| 4433128 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.54 | 43.0 | 3.56e-01 | 100.0% | 47.4% |
| 3219406 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 45.0 | 4.58e-01 | 100.0% | 96.0% |
| 5077459 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 39.0 | 2.90e-01 | 100.0% | 28.3% |
| 3739289 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.52 | 42.0 | 3.05e-01 | 98.0% | 65.9% |
| 3527717 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 34.0 | 3.45e-01 | 98.0% | 66.0% |
| 4011666 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.52 | 40.0 | 2.41e-01 | 88.0% | 24.3% |
| 3329059 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.52 | 33.0 | 3.40e-01 | 70.0% | 66.0% |
| 3389168 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.51 | 43.0 | 2.94e-01 | 100.0% | 38.5% |
| 3790199 | 64.5.1.0 ↗ | beta meanders › WW domain-like › Connector region of RNA helicase HrpB › Connector region of RNA helicase HrpB | 0.50 | 34.0 | 3.22e-01 | 70.0% | 58.3% |