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GU580942.1__ADD81085.1__Poco6gene087__00087

Bact-Vir

GU580942.1__ADD81085.1__Poco6gene087__00087

Identity

Accession:
GU580942 ↗
Kingdom:
phage

Quality

78.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-66
PDB
Domain cluster: representative
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sr2A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.92 75.0 6.06e-01 95.5% 49.1%
4rngC00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.89 61.0 5.57e-01 71.2% 56.6%
1tqgA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.87 80.0 6.77e-01 100.0% 67.6%
3nymA00 6.10.290.10 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.87 59.0 4.72e-01 71.2% 39.5%
5jc3A02 1.20.1320.30 Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › 0.86 61.0 4.82e-01 90.9% 38.9%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.86 59.0 4.83e-01 71.2% 42.9%
5jajA03 1.20.1320.30 Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › 0.85 62.0 5.01e-01 95.5% 43.1%
4x5mA00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.84 58.0 5.31e-01 72.7% 55.8%
4yvoA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.84 69.0 5.61e-01 98.5% 49.6%
1yvwA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.84 63.0 5.53e-01 78.8% 56.5%
2a0bA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.83 69.0 5.55e-01 93.9% 49.2%
3ro3A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.83 69.0 5.08e-01 98.5% 37.1%
1gqeA01 1.20.58.410 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor 0.83 59.0 4.82e-01 74.2% 43.4%
2yxhA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.82 59.0 4.91e-01 75.8% 44.2%
1vmgA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.82 59.0 5.44e-01 75.8% 61.0%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.82 74.0 5.93e-01 100.0% 64.0%
2ondA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.81 72.0 4.63e-01 100.0% 23.1%
4b6xA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 56.0 5.52e-01 71.2% 71.0%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.80 71.0 6.89e-01 100.0% 94.7%
1z0pA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 55.0 5.34e-01 71.2% 71.2%
1a7eA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.80 71.0 5.87e-01 100.0% 61.9%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.80 55.0 5.04e-01 71.2% 88.2%
4uqxA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.80 60.0 5.36e-01 97.0% 58.4%
3zsuA00 1.20.120.290 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle 0.80 70.0 5.82e-01 100.0% 65.3%
7e9uA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.79 71.0 4.23e-01 100.0% 31.9%
1tjoB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.79 71.0 5.15e-01 100.0% 79.4%
2chpA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.79 71.0 5.43e-01 100.0% 93.2%
2pmrA00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.79 55.0 5.24e-01 74.2% 63.2%
2c41C01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.78 71.0 5.39e-01 100.0% 92.6%
4qndA00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.78 53.0 4.69e-01 71.2% 48.5%
1wfdA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.78 69.0 6.16e-01 100.0% 77.4%
3iq1B00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.78 69.0 5.18e-01 100.0% 86.8%
4dmvA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 68.0 6.32e-01 100.0% 81.2%
3unoE00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.77 69.0 5.11e-01 100.0% 79.0%
1bgfA00 1.10.532.10 Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain 0.77 66.0 5.34e-01 93.9% 53.2%
3u3iA02 1.20.58.1110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 63.0 5.29e-01 87.9% 81.5%
2v5cA03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.77 68.0 5.47e-01 100.0% 97.7%
2a9uA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.77 58.0 4.69e-01 81.8% 42.9%
3tulB00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.77 52.0 4.14e-01 71.2% 39.1%
2okuA00 1.20.120.470 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Acyl-CoA dehydrogenase, C-terminal domain 0.76 52.0 4.26e-01 71.2% 39.3%
1s3qG00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.76 67.0 5.06e-01 100.0% 80.4%
8amzT01 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.76 68.0 4.50e-01 100.0% 28.0%
2fbaA00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.75 67.0 3.96e-01 100.0% 15.4%
7c1iA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.75 62.0 5.46e-01 100.0% 62.0%
2fjcB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.75 66.0 5.01e-01 100.0% 89.1%
1dkxA02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.75 51.0 4.80e-01 71.2% 61.3%
1luwA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.74 51.0 5.18e-01 71.2% 73.4%
4k0dA00 1.20.120.1730 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.73 64.0 5.02e-01 100.0% 57.3%
2l6jA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.73 62.0 5.17e-01 100.0% 55.0%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.72 61.0 5.48e-01 100.0% 76.3%
1aueB00 1.20.120.150 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › FKBP12-rapamycin binding domain 0.71 61.0 5.50e-01 98.5% 78.7%
2katA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.71 64.0 5.29e-01 100.0% 79.1%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.70 54.0 4.93e-01 83.3% 82.8%
2l3lA01 1.20.58.1250 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain 0.68 60.0 5.17e-01 100.0% 68.9%
3jsbA01 1.20.1440.300 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain 0.67 54.0 5.17e-01 100.0% 75.3%
2qgmA03 1.20.1440.30 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Biosynthetic Protein domain 0.67 57.0 4.86e-01 100.0% 62.1%
1fpoC02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.66 55.0 5.10e-01 98.5% 90.1%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.65 55.0 4.92e-01 100.0% 88.2%
3ihuA02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.63 52.0 4.13e-01 92.4% 74.8%
3gonA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.62 54.0 4.35e-01 100.0% 77.6%
2ra1A03 1.20.58.770 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 50.0 5.16e-01 97.0% 100.0%
1yj8A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.59 46.0 3.51e-01 84.8% 39.9%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3336677 605.1.1.132 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF641 0.92 63.0 6.05e-01 71.2% 65.3%
3802185 192.8.1.359 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF641 0.90 62.0 6.10e-01 71.2% 70.0%
5031890 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.90 62.0 4.04e-01 71.2% 20.0%
3437925 605.1.1.132 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF641 0.90 62.0 5.35e-01 71.2% 51.6%
5077935 109.4.1.5 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.89 83.0 5.55e-01 100.0% 39.5%
4214723 109.4.1.1248 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF2753 0.88 82.0 6.39e-01 100.0% 53.8%
4386662 3291.1.1.158 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Seryl_tRNA_N 0.88 61.0 4.92e-01 71.2% 42.6%
3284805 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.88 80.0 6.25e-01 100.0% 61.5%
5007109 601.3.1.1 alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.88 80.0 6.32e-01 100.0% 53.1%
5045256 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.87 80.0 7.02e-01 100.0% 89.5%
3387891 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.87 66.0 3.75e-01 97.0% 8.4%
5013248 601.3.1.1 alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.87 79.0 6.33e-01 100.0% 61.6%
3783832 3684.1.1.0 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.87 79.0 6.06e-01 100.0% 58.7%
3296414 192.29.1.168 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF641 0.87 59.0 5.85e-01 71.2% 67.1%
3303271 109.4.1.3032 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_14, TPR_19, PF29376 0.86 74.0 4.57e-01 93.9% 18.0%
4165434 192.6.1.1 alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE 0.85 59.0 6.61e-01 71.2% 94.0%
5062478 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.84 78.0 6.93e-01 100.0% 85.6%
143387 601.3.1.1 alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.84 76.0 6.29e-01 100.0% 62.8%
3983391 6155.2.1.1 alpha duplicates or obligate multimers › TOG superfamily › PnuC › PnuC › NMN_transporter 0.83 76.0 5.17e-01 100.0% 30.9%
5078340 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.83 73.0 6.58e-01 98.5% 81.1%
1719259 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.82 73.0 5.06e-01 97.0% 35.3%
4965788 150.1.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin 0.82 73.0 5.57e-01 95.5% 96.4%
5053401 601.33.1.0 alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain 0.82 74.0 7.30e-01 100.0% 94.3%
4947470 150.1.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin 0.82 75.0 5.82e-01 100.0% 96.3%
4127 159.1.2.2 alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › MazG 0.82 59.0 5.42e-01 75.8% 60.2%
5047702 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.81 71.0 4.75e-01 97.0% 32.2%
3522803 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.81 67.0 4.59e-01 98.5% 27.4%
5079439 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.81 72.0 6.18e-01 100.0% 72.4%
4099036 109.4.1.8 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1,TPR_12 0.81 67.0 4.95e-01 92.4% 36.4%
4041987 109.4.1.5 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.81 67.0 4.98e-01 92.4% 37.1%
4972007 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.81 71.0 5.58e-01 100.0% 57.9%
4975050 3843.1.1.0 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.80 72.0 6.92e-01 100.0% 98.7%
4606564 6155.2.1.1 alpha duplicates or obligate multimers › TOG superfamily › PnuC › PnuC › NMN_transporter 0.80 72.0 5.15e-01 100.0% 36.8%
3682397 604.12.1.65 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT_ATG1 0.80 71.0 6.23e-01 100.0% 75.5%
3607867 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.80 68.0 5.04e-01 93.9% 39.4%
3895157 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.80 70.0 5.64e-01 98.5% 51.2%
5057379 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.80 69.0 5.59e-01 95.5% 51.7%
3784728 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.80 73.0 4.68e-01 100.0% 23.5%
4489379 109.4.1.192 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.79 66.0 4.85e-01 92.4% 36.4%
2503462 601.33.1.1 alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › CHAD 0.79 70.0 6.19e-01 97.0% 73.4%
4514975 109.4.1.1879 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_11, TPR_12 0.79 65.0 4.83e-01 92.4% 36.4%
4990623 6155.1.1.0 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.79 54.0 5.32e-01 74.2% 67.1%
3682681 109.4.1.1146 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_PUB 0.78 67.0 3.92e-01 92.4% 21.4%
5073502 159.1.1.0 alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 0.78 56.0 5.05e-01 75.8% 55.6%
4024450 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.78 70.0 5.04e-01 98.5% 63.3%
3603360 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.78 69.0 5.75e-01 100.0% 82.6%
3465109 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.78 68.0 4.78e-01 97.0% 33.5%
4996707 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.77 70.0 6.53e-01 100.0% 92.5%
3788338 604.12.1.9 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 0.77 66.0 6.38e-01 98.5% 93.2%
3177558 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.76 63.0 5.36e-01 89.4% 82.9%
3599828 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 65.0 4.02e-01 100.0% 17.5%
4881789 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.76 66.0 6.01e-01 95.5% 77.0%
4881794 109.3.1.211 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › ANAPC5 0.75 66.0 5.03e-01 97.0% 45.9%
2818706 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.75 68.0 4.61e-01 100.0% 62.6%
3453029 611.7.1.16 alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › PUB2_N 0.75 68.0 4.70e-01 100.0% 66.7%
4987735 601.1.2.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.74 63.0 5.29e-01 95.5% 78.3%
3739990 109.2.1.2 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_15 0.74 65.0 3.97e-01 100.0% 17.0%
3572847 604.1.1.162 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF4716 0.74 66.0 5.48e-01 100.0% 77.4%
3985675 3579.1.1.30 extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › Imp-YgjV 0.73 64.0 5.05e-01 100.0% 53.6%
3770274 603.1.1.198 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF4716 0.73 62.0 5.54e-01 95.5% 90.5%
3266547 109.4.1.1307 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps52_CC, Vps52_C 0.71 63.0 3.61e-01 97.0% 21.7%
3733668 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.71 60.0 4.60e-01 93.9% 50.0%
4985507 604.10.1.0 alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac 0.70 62.0 5.64e-01 100.0% 98.9%
3511170 1134.1.1.0 alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.70 61.0 5.90e-01 100.0% 86.7%
3601623 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.70 60.0 5.48e-01 98.5% 84.4%
4608200 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.69 60.0 4.92e-01 100.0% 95.2%
3563679 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.67 58.0 5.04e-01 100.0% 82.9%
3272203 109.4.1.602 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dor1 0.63 54.0 3.40e-01 100.0% 16.9%
3600238 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 51.0 3.14e-01 89.4% 34.7%
2391543 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.56 47.0 3.50e-01 100.0% 81.7%
D2 high residues 81-163
PDB
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k49A00 2.30.29.80 Mainly Beta › Roll › PH-domain like › 0.69 52.0 4.56e-01 78.3% 92.4%
5f7pA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.66 53.0 4.69e-01 89.2% 78.0%
1xc3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.66 53.0 5.00e-01 89.2% 91.3%
3c65A00 3.30.420.340 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain 0.64 53.0 4.41e-01 94.0% 60.3%
4htlA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 51.0 4.87e-01 89.2% 93.0%
2gupA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 51.0 4.86e-01 88.0% 92.8%
2ap1A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 50.0 4.30e-01 89.2% 69.8%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 41.0 3.89e-01 77.1% 54.9%
3h6eB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 52.0 4.92e-01 92.8% 85.9%
3psfA04 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.62 51.0 4.14e-01 92.8% 53.0%
3bzcA03 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.62 49.0 4.33e-01 89.2% 63.3%
4ktwA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.61 49.0 3.99e-01 88.0% 60.0%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.61 48.0 4.09e-01 86.7% 51.4%
4o5fA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 47.0 4.17e-01 88.0% 95.3%
2w40A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 49.0 3.51e-01 92.8% 89.4%
2itmA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 48.0 3.55e-01 92.8% 91.7%
2f9wA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 45.0 4.08e-01 84.3% 94.9%
3htvA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 46.0 4.28e-01 89.2% 91.0%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 38.0 4.20e-01 71.1% 86.4%
6n9aB02 3.30.420.200 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.58 37.0 3.91e-01 74.7% 76.8%
3t69A01 3.30.420.300 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, substrate binding domain 0.57 44.0 4.62e-01 83.1% 97.3%
1bqnA05 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.57 48.0 4.21e-01 97.6% 68.7%
3ll3B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 46.0 3.41e-01 94.0% 88.2%
4jn7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 39.0 3.47e-01 89.2% 51.3%
3hvnA01 3.90.840.10 Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain 0.54 38.0 3.13e-01 75.9% 74.4%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 41.0 3.34e-01 83.1% 98.1%
7b7tA03 3.40.50.2030 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 42.0 3.15e-01 89.2% 58.9%
3gm8A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 3.54e-01 78.3% 96.4%
1cboA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 44.0 2.98e-01 96.4% 70.2%
2rgnB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 44.0 3.89e-01 95.2% 84.6%
3n28A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.51 40.0 3.38e-01 88.0% 70.8%
7b7pA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.51 42.0 3.04e-01 92.8% 85.9%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 28.0 2.97e-01 75.9% 55.6%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5075465 4325.1.1.0 mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.73 48.0 5.50e-01 97.6% 91.7%
3978292 2484.1.1.251 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF26691 0.70 64.0 4.06e-01 98.8% 49.1%
3661849 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.68 46.0 5.21e-01 96.4% 93.7%
4932280 3407.1.1.0 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.67 43.0 4.19e-01 74.7% 60.0%
4183381 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.67 54.0 5.12e-01 88.0% 97.0%
4484723 220.1.1.126 beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 0.67 46.0 4.27e-01 74.7% 56.7%
4517494 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.65 53.0 4.60e-01 89.2% 72.3%
4890112 2484.1.1.327 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Spt6_S1 0.63 43.0 3.85e-01 73.5% 49.2%
3355734 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.63 52.0 4.83e-01 92.8% 87.0%
4881988 220.1.1.19 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.63 39.0 4.04e-01 72.3% 66.7%
3515139 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 48.0 3.79e-01 83.1% 59.2%
4278695 2484.1.1.101 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 0.62 53.0 5.47e-01 97.6% 97.5%
4116094 2484.1.1.37 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.62 49.0 4.48e-01 88.0% 65.2%
3315195 2484.1.1.106 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.61 49.0 3.61e-01 88.0% 34.3%
3250206 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.61 44.0 4.62e-01 77.1% 92.0%
5062242 2484.1.1.21 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.61 49.0 3.88e-01 89.2% 78.9%
3778135 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.60 47.0 3.84e-01 83.1% 67.3%
4110965 2484.1.1.37 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.60 49.0 4.14e-01 89.2% 57.1%
3227570 220.1.1.47 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.60 47.0 3.69e-01 83.1% 60.6%
1307002 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.60 50.0 4.49e-01 94.0% 76.0%
3951189 2484.1.1.68 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 0.60 49.0 3.64e-01 91.6% 40.9%
4129199 2484.1.1.37 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.59 47.0 4.18e-01 88.0% 64.8%
1148120 2484.1.1.46 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DGOK 0.59 46.0 4.02e-01 85.5% 74.8%
3215691 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.59 49.0 3.39e-01 92.8% 35.6%
4956002 2484.4.1.0 mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like 0.59 48.0 4.47e-01 92.8% 75.5%
3701275 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 43.0 3.65e-01 79.5% 48.6%
3592269 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 40.0 3.43e-01 72.3% 45.2%
3258838 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.57 45.0 3.78e-01 85.5% 72.7%
4381129 2484.1.1.37 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.57 46.0 3.92e-01 89.2% 79.1%
3510425 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.57 44.0 3.59e-01 83.1% 72.9%
5073342 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.57 48.0 4.36e-01 96.4% 81.6%
3846584 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 41.0 3.18e-01 75.9% 89.1%
3920905 220.1.1.19 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.56 42.0 3.72e-01 81.9% 60.5%
3487488 220.1.1.37 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_13 0.54 47.0 3.85e-01 95.2% 86.7%
3750217 220.1.1.27 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.53 37.0 3.06e-01 74.7% 41.2%
3589077 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.52 40.0 3.59e-01 83.1% 86.7%
2834433 7515.1.1.5 a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,SGSH_C 0.51 42.0 2.68e-01 97.6% 41.1%
3579382 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.51 44.0 4.20e-01 100.0% 90.0%
3793604 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 43.0 3.59e-01 95.2% 81.4%
3278946 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.50 45.0 2.84e-01 98.8% 80.2%