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GU580943.1__ADD81124.1__ReqiPine5gene19__00019
Bact-VirGU580943.1__ADD81124.1__ReqiPine5gene19__00019
Identity
- Accession:
- GU580943 ↗
- Kingdom:
- phage
Quality
78.3
mean pLDDT
Taxonomy
TaxID: 691963
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-80
Domain cluster:
representative
D2
medium
residues 81-145
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ux1D00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.75 | 52.0 | 3.63e-01 | 72.3% | 25.9% |
| 5nl6B01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 55.0 | 4.50e-01 | 83.1% | 52.1% |
| 3b34A05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.67 | 47.0 | 2.94e-01 | 72.3% | 14.8% |
| 1gakA00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.66 | 52.0 | 4.04e-01 | 84.6% | 97.1% |
| 7krzA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 39.0 | 3.63e-01 | 76.9% | 47.6% |
| 1hcyA02 | 1.10.1280.10 | Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase | 0.60 | 46.0 | 3.15e-01 | 81.5% | 57.9% |
| 1ni5A02 | 1.20.59.20 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › | 0.58 | 35.0 | 3.23e-01 | 76.9% | 45.3% |
| 4glwA01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.50 | 36.0 | 2.53e-01 | 76.9% | 85.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3783596 | 601.44.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in anaphase-promoting complex subunit 4 › Helical bundle domain in anaphase-promoting complex subunit 4 › ANAPC4 | 0.73 | 62.0 | 4.23e-01 | 92.3% | 43.2% |
| 3224581 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.73 | 55.0 | 5.00e-01 | 81.5% | 61.2% |
| 3627844 | 3331.1.1.8 ↗ | a+b two layers › Uncharacterized protein yibL › Uncharacterized protein yibL › Uncharacterized protein yibL › RRP36 | 0.71 | 60.0 | 4.85e-01 | 95.4% | 60.8% |
| 3915497 | 378.1.2.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › Inactive Tox-GHH domain of teneurin › Tox-GHH | 0.71 | 58.0 | 5.15e-01 | 87.7% | 78.9% |
| 4567778 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.71 | 60.0 | 3.57e-01 | 95.4% | 45.2% |
| 3696222 | 109.4.1.1379 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30880 | 0.71 | 49.0 | 2.93e-01 | 73.8% | 10.3% |
| 3580409 | 3826.1.1.26 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › RRP36 | 0.70 | 60.0 | 4.77e-01 | 96.9% | 59.3% |
| 4310158 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.70 | 59.0 | 3.51e-01 | 93.8% | 46.2% |
| 3719269 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 50.0 | 4.48e-01 | 81.5% | 54.4% |
| 4014379 | 149.1.1.0 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 | 0.69 | 59.0 | 3.52e-01 | 95.4% | 46.7% |
| 4013983 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.68 | 59.0 | 3.45e-01 | 93.8% | 47.9% |
| 4180987 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.68 | 57.0 | 3.36e-01 | 93.8% | 45.5% |
| 3575022 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.67 | 48.0 | 4.14e-01 | 75.4% | 56.0% |
| 3975557 | 3782.1.1.0 ↗ | a+b duplicates or obligate multimers › Envelope glycoprotein GP2-related › Envelope glycoprotein GP2-related › Envelope glycoprotein GP2-related | 0.67 | 47.0 | 4.73e-01 | 75.4% | 72.3% |
| 3244244 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.65 | 52.0 | 4.88e-01 | 86.2% | 87.5% |
| 3961249 | 206.1.3.5 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_aden | 0.62 | 35.0 | 2.66e-01 | 73.8% | 22.8% |
| 4321612 | 206.1.3.5 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_aden | 0.58 | 39.0 | 2.61e-01 | 70.8% | 91.0% |