←Back to structures
GU580943.1__ADD81139.1__ReqiPine5gene34__00034
Bact-VirGU580943.1__ADD81139.1__ReqiPine5gene34__00034
Identity
- Accession:
- GU580943 ↗
- Kingdom:
- phage
Quality
74.2
mean pLDDT
Taxonomy
TaxID: 691963
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 38-108
Domain cluster:
rep: NC_071004.1__YP_010675483.1__PQD13_gp54__00054__D91-174
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23781.2 best | Phage_TAC_16 | 82.2 | 3.80e-23 | 100.0% | 62.8% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1epuA03 | 1.25.40.60 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.69 | 43.0 | 3.52e-01 | 90.1% | 35.5% |
| 3ne5B04 | 6.10.140.730 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 43.0 | 4.87e-01 | 98.6% | 100.0% |
| 2glzA00 | 3.30.1330.130 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › | 0.60 | 42.0 | 3.32e-01 | 73.2% | 83.9% |
| 4irnA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.58 | 39.0 | 3.33e-01 | 70.4% | 94.1% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 36.0 | 3.55e-01 | 88.7% | 57.7% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.55 | 48.0 | 4.53e-01 | 100.0% | 80.0% |
| 2or0B01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.54 | 37.0 | 3.17e-01 | 73.2% | 96.0% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.53 | 37.0 | 3.76e-01 | 95.8% | 72.6% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.53 | 45.0 | 3.93e-01 | 100.0% | 79.5% |
| 4cfsA02 | 1.10.210.20 | Mainly Alpha › Orthogonal Bundle › Uteroglobin › | 0.52 | 42.0 | 4.29e-01 | 97.2% | 92.9% |
| 3ecsC01 | 1.20.120.1070 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain | 0.51 | 40.0 | 3.59e-01 | 84.5% | 96.0% |
| 7ce1A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 34.0 | 3.88e-01 | 95.8% | 94.2% |
| 4u04B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 42.0 | 3.92e-01 | 90.1% | 75.0% |
| 2xgsB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 40.0 | 4.01e-01 | 85.9% | 98.6% |
| 2rfqB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.50 | 36.0 | 3.25e-01 | 95.8% | 51.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3398490 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.63 | 44.0 | 4.56e-01 | 100.0% | 80.0% |
| 4999746 | 109.23.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain in vacuolar protein sorting-associated protein 54 › C-terminal domain in vacuolar protein sorting-associated protein 54 | 0.57 | 40.0 | 3.66e-01 | 95.8% | 54.7% |
| 4139607 | 101.1.1.74 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_3 | 0.55 | 44.0 | 4.37e-01 | 93.0% | 96.0% |
| 4193940 | 101.1.1.74 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_3 | 0.54 | 44.0 | 4.47e-01 | 93.0% | 100.0% |
| 3164109 | 101.1.1.74 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_3 | 0.54 | 41.0 | 4.18e-01 | 85.9% | 97.1% |
| 3865185 | 611.3.1.1 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 | 0.51 | 43.0 | 3.94e-01 | 93.0% | 80.0% |
| 4016737 | 109.4.1.182 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HUS,DCB | 0.51 | 40.0 | 2.54e-01 | 85.9% | 33.6% |
| 3471670 | 611.3.1.1 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 | 0.50 | 43.0 | 4.25e-01 | 94.4% | 96.0% |
| 3213149 | 109.4.1.15 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VHS | 0.50 | 44.0 | 3.38e-01 | 95.8% | 58.1% |