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GU580943.1ADD81181.1ReqiPine5gene76__00076

Bact-Vir

GU580943.1__ADD81181.1__ReqiPine5gene76__00076

Identity

Accession:: GU580943 ↗
Kingdom:: phage

Quality

93.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Reqipinevirus› Rhodococcus_phage_ReqiPine5

TaxID: 691963

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-114

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4krdB00	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.58	40.0	3.31e-01	70.1%	81.1%
3gxvB00	1.10.860.10	Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A	0.56	42.0	3.98e-01	78.5%	98.4%
3c07B00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.55	37.0	2.96e-01	80.4%	35.0%
3c7mA00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.54	38.0	3.11e-01	72.0%	63.1%
1f44A01	1.10.443.10	Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core	0.54	40.0	3.32e-01	77.6%	93.8%
2e18A00	3.40.50.620	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs	0.53	34.0	2.62e-01	75.7%	27.3%
1t9kA01	1.20.120.420	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1	0.51	36.0	3.30e-01	72.0%	71.4%
2yveB00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.51	39.0	3.33e-01	81.3%	98.3%
1vkeB00	1.20.1290.10	Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like	0.50	35.0	3.58e-01	71.0%	84.2%

ECOD (14)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5002577	101.1.1.60 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_23	0.69	50.0	4.83e-01	82.2%	67.5%
3741951	3226.1.1.2 ↗	alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Sulfate_transp	0.59	43.0	2.89e-01	77.6%	97.5%
3544351	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.58	42.0	2.91e-01	77.6%	24.4%
3281947	150.1.2.10 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › AurF	0.57	44.0	3.16e-01	81.3%	53.0%
None	—		0.56	38.0	3.85e-01	70.1%	69.5%
4140444	101.1.1.26 ↗	alpha arrays › HTH › HTH › Three-helical HTH › UPF0122	0.56	38.0	3.81e-01	71.0%	67.3%
3390061	5063.1.1.22 ↗	alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › LIN9_C	0.56	40.0	4.05e-01	75.7%	97.3%
1559081	109.2.1.24 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › TED_complement	0.56	41.0	3.13e-01	77.6%	85.4%
3571298	5059.1.1.8 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Mg_trans_NIPA	0.55	40.0	3.39e-01	76.6%	64.6%
4518397	101.1.2.40 ↗	alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3	0.54	38.0	3.46e-01	73.8%	61.3%
5062650	101.1.2.40 ↗	alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3	0.52	37.0	3.52e-01	73.8%	71.2%
1879843	101.1.1.5 ↗	alpha arrays › HTH › HTH › Three-helical HTH › TetR_N	0.51	36.0	3.73e-01	84.1%	78.8%
4037682	101.1.1.26 ↗	alpha arrays › HTH › HTH › Three-helical HTH › UPF0122	0.51	37.0	3.80e-01	84.1%	83.0%
4965845	101.1.8.1 ↗	alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase	0.50	37.0	3.13e-01	78.5%	91.6%