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GU903191.1__ADE87908.1__X__00003

Bact-Vir

GU903191.1__ADE87908.1__X__00003

Identity

Accession:
GU903191 ↗
Kingdom:
phage

Quality

91.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-86
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.67 43.0 4.35e-01 81.7% 66.3%
3iayA01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 41.0 3.90e-01 85.4% 52.0%
3ro6C01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.66 54.0 4.96e-01 89.0% 99.1%
3toyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.65 54.0 4.73e-01 92.7% 92.1%
3msyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.64 53.0 4.84e-01 91.5% 95.5%
4g79A00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.64 58.0 4.89e-01 100.0% 76.9%
1bqgA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.63 53.0 4.50e-01 92.7% 80.4%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 44.0 3.82e-01 74.4% 46.5%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 49.0 3.34e-01 85.4% 32.7%
4jn7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 52.0 4.60e-01 92.7% 85.7%
3sjnA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.61 51.0 4.53e-01 92.7% 99.2%
1ocsA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 48.0 4.16e-01 87.8% 93.9%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 47.0 4.19e-01 87.8% 91.1%
4dkkA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 44.0 4.58e-01 93.9% 86.5%
3mcrA00 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.59 43.0 3.50e-01 75.6% 40.3%
3rcyB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.59 48.0 4.13e-01 92.7% 78.0%
3cetB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 35.0 3.21e-01 72.0% 42.7%
2gdqA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.59 49.0 4.51e-01 92.7% 99.1%
4bgjA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.59 47.0 4.20e-01 87.8% 89.8%
6ksrA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 40.0 3.25e-01 72.0% 46.9%
1bdgA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 40.0 3.20e-01 72.0% 41.5%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.58 34.0 4.14e-01 78.0% 94.1%
1ig8A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 41.0 3.46e-01 73.2% 49.3%
1gd5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 44.0 3.90e-01 86.6% 89.2%
4h0pA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 45.0 3.43e-01 89.0% 34.8%
4mp8A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.56 49.0 3.98e-01 100.0% 57.8%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 41.0 4.28e-01 79.3% 84.0%
5cr4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 45.0 3.39e-01 93.9% 84.4%
4d8pB01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.55 37.0 3.52e-01 70.7% 78.4%
3pqvA02 3.30.360.20 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain 0.53 38.0 3.66e-01 75.6% 97.9%
3rbyA02 2.40.128.310 Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain 0.53 41.0 3.94e-01 84.1% 84.2%
6r2nA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 39.0 3.35e-01 87.8% 47.1%
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.53 46.0 2.96e-01 98.8% 23.3%
2vqeE01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 37.0 4.02e-01 92.7% 98.4%
2mcfA00 3.40.50.11630 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 45.0 3.75e-01 100.0% 56.1%
1hw7A01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.51 40.0 3.21e-01 87.8% 59.0%
3deeA02 3.90.930.50 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.51 42.0 3.75e-01 90.2% 80.7%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 39.0 3.25e-01 85.4% 68.9%
5g5gB02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.50 38.0 3.66e-01 98.8% 71.3%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3865506 4210.1.1.3 a+b two layers › WGR domain › WGR domain › WGR domain › PF26166 0.75 59.0 5.26e-01 82.9% 63.6%
3864513 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.74 52.0 4.43e-01 75.6% 47.2%
3228242 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.71 54.0 5.02e-01 81.7% 66.0%
3170786 223.2.1.18 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin_2 0.69 56.0 4.34e-01 89.0% 40.6%
3183690 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 48.0 3.88e-01 76.8% 39.3%
4938125 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.68 50.0 4.96e-01 76.8% 81.2%
3258581 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 44.0 2.95e-01 76.8% 17.3%
3512452 223.1.1.23 a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 0.66 52.0 4.67e-01 85.4% 65.2%
3683412 62.1.1.1 beta meanders › Carbonic anhydrase › Carbonic anhydrase › Carbonic anhydrase › Carb_anhydrase 0.66 53.0 3.99e-01 85.4% 50.8%
3278704 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.64 49.0 4.97e-01 87.8% 83.7%
3932851 220.1.1.46 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.64 46.0 4.03e-01 74.4% 53.3%
4587218 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.63 52.0 4.61e-01 92.7% 89.4%
4338151 220.1.1.87 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.63 44.0 3.65e-01 73.2% 42.1%
416354 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.63 52.0 4.61e-01 92.7% 90.9%
5025053 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 43.0 3.60e-01 78.0% 42.2%
4028996 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 40.0 3.33e-01 75.6% 36.6%
3711062 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 49.0 4.63e-01 93.9% 73.0%
3566463 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.60 43.0 3.33e-01 73.2% 38.9%
3495949 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 45.0 4.36e-01 93.9% 73.3%
3281114 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.59 48.0 4.09e-01 91.5% 84.3%
4593266 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.59 40.0 4.18e-01 76.8% 77.3%
4947437 2484.1.1.23 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydantoinase_A 0.59 39.0 3.51e-01 81.7% 48.7%
4017305 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 46.0 3.16e-01 86.6% 29.3%
4837843 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.58 38.0 4.31e-01 93.9% 88.9%
3859768 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 40.0 3.18e-01 73.2% 38.9%
3356898 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.57 47.0 4.00e-01 96.3% 94.7%
2859147 7091.1.1.1 a+b complex topology › C-terminal domain of DNA repair helicase RadD › C-terminal domain of DNA repair helicase RadD › C-terminal domain of DNA repair helicase RadD › PF29401 0.57 45.0 3.76e-01 87.8% 64.7%
3281018 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.57 50.0 4.72e-01 98.8% 97.0%
2754796 330.2.1.1 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE 0.56 50.0 4.67e-01 100.0% 94.1%
2391612 319.2.1.1 beta sandwiches › HSP20-like › Pre-mRNA-splicing factor PRP11 C-terminal domain › Pre-mRNA-splicing factor PRP11 C-terminal domain › SF3A2 0.56 42.0 3.85e-01 78.0% 74.3%
3206632 896.1.1.2 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 0.56 40.0 4.04e-01 76.8% 80.0%
5038844 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.55 45.0 4.63e-01 96.3% 96.2%
5010128 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.55 42.0 3.50e-01 82.9% 45.9%
3569462 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 38.0 3.24e-01 72.0% 52.9%
3928618 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 42.0 3.90e-01 93.9% 66.7%
3456535 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 44.0 4.09e-01 92.7% 80.9%
3283166 325.1.6.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 0.54 39.0 2.71e-01 75.6% 61.1%
4528679 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.53 46.0 3.94e-01 100.0% 59.3%
3268843 331.18.1.4 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.53 37.0 2.88e-01 72.0% 67.4%
4025315 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.53 40.0 3.68e-01 87.8% 60.9%
3759486 330.1.1.2 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 0.53 39.0 4.01e-01 89.0% 82.5%
3551034 11.1.1.96 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.53 38.0 3.56e-01 76.8% 84.8%
3174327 4.1.1.41 beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.53 35.0 2.73e-01 81.7% 28.7%
3917310 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.53 34.0 3.70e-01 74.4% 81.5%
3543177 11.1.1.1096 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_PVRIG 0.53 43.0 3.86e-01 89.0% 85.2%
5072273 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 36.0 3.28e-01 75.6% 49.2%
3409738 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.53 34.0 3.81e-01 75.6% 83.1%
3507914 2004.1.1.294 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ELP6 0.53 36.0 2.67e-01 72.0% 88.1%
3908855 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 34.0 3.91e-01 96.3% 100.0%
4542063 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.53 45.0 3.98e-01 100.0% 64.8%
4089593 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.53 45.0 3.95e-01 100.0% 62.3%
3444419 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.52 44.0 4.19e-01 96.3% 83.0%
4887510 3274.1.1.1 extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 0.52 38.0 3.79e-01 85.4% 76.2%
357202 896.1.1.2 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 0.52 37.0 3.77e-01 76.8% 79.3%
5004264 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 44.0 3.93e-01 100.0% 65.9%
3676562 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.52 40.0 3.07e-01 96.3% 34.1%
3080512 330.2.1.1 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE 0.52 44.0 4.23e-01 97.6% 93.8%
185160 3551.1.1.1 alpha arrays › Pfam family PF09836 C-terminal domain › Pfam family PF09836 C-terminal domain › Pfam family PF09836 C-terminal domain › NGO1945_C 0.52 42.0 3.79e-01 87.8% 82.9%
3806458 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.51 45.0 3.78e-01 100.0% 63.4%
3255783 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.51 34.0 3.67e-01 73.2% 80.0%
4350188 3504.2.1.1 beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco 0.51 41.0 3.32e-01 87.8% 93.1%
3511040 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.51 40.0 3.81e-01 87.8% 74.0%
5023892 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.51 43.0 3.83e-01 98.8% 62.8%
3609915 2484.8.1.1 mixed a+b and a/b › Ribonuclease H-like › Separase pseudo-protease domain (PPD) › Separase pseudo-protease domain (PPD) › Peptidase_C50 0.51 40.0 2.77e-01 86.6% 49.5%
3516854 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 35.0 3.19e-01 72.0% 56.5%
3844858 220.1.1.39 beta barrels › PH domain-like › PH domain-like › PH domain-like › ZFYVE21_C 0.51 37.0 3.04e-01 78.0% 81.8%
3942438 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.50 39.0 3.65e-01 90.2% 65.5%
3726895 206.1.1.55 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL 0.50 41.0 2.85e-01 93.9% 68.4%
3487886 2485.2.1.0 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain 0.50 41.0 3.86e-01 95.1% 76.2%