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GU911519.1__ADG36189.1__Acj61p224__00224
Bact-VirGU911519.1__ADG36189.1__Acj61p224__00224
Identity
- Accession:
- GU911519 ↗
- Kingdom:
- phage
Quality
80.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Lasallevirus›
Acinetobacter_phage_Acj61
TaxID: 760732
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 100-159
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z21A00 | 1.10.10.1000 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain | 0.70 | 50.0 | 4.34e-01 | 76.7% | 54.2% |
| 4wojA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.67 | 52.0 | 3.57e-01 | 85.0% | 24.5% |
| 2oerA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.65 | 55.0 | 4.02e-01 | 100.0% | 68.7% |
| 6ircA01 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.65 | 48.0 | 3.41e-01 | 83.3% | 44.8% |
| 3n8hA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.63 | 51.0 | 4.68e-01 | 86.7% | 80.3% |
| 4wh5A00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.58 | 41.0 | 3.04e-01 | 76.7% | 40.5% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.57 | 40.0 | 2.87e-01 | 75.0% | 26.7% |
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 38.0 | 3.22e-01 | 73.3% | 45.8% |
| 2kwhA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 37.0 | 3.82e-01 | 75.0% | 76.8% |
| 4xviA01 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.54 | 42.0 | 3.30e-01 | 88.3% | 58.3% |
| 3tl4X01 | 1.10.8.1290 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1, domain 1 | 0.54 | 47.0 | 3.81e-01 | 98.3% | 70.2% |
| 1lj2A00 | 1.20.5.970 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Nonstructural RNA-binding protein | 0.53 | 41.0 | 3.58e-01 | 100.0% | 52.8% |
| 1wdzA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.52 | 44.0 | 3.05e-01 | 100.0% | 81.4% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3298325 | 3846.1.1.0 ↗ | alpha bundles › IcmR › IcmR › IcmR | 0.90 | 58.0 | 6.67e-01 | 73.3% | 88.9% |
| 3940619 | 109.4.1.2546 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3, TPR_8, TPR_17, CHIP_TPR_N | 0.80 | 56.0 | 3.77e-01 | 73.3% | 22.0% |
| 3972191 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.73 | 52.0 | 3.89e-01 | 75.0% | 31.4% |
| None | — | 0.72 | 49.0 | 3.20e-01 | 75.0% | 15.9% | |
| 3573038 | 4207.1.1.99 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › PF28139 | 0.69 | 48.0 | 4.23e-01 | 73.3% | 48.9% |
| 3628497 | 4082.1.1.0 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain | 0.69 | 48.0 | 5.17e-01 | 73.3% | 90.0% |
| 4946843 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.68 | 55.0 | 5.43e-01 | 93.3% | 81.5% |
| 4987225 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.66 | 57.0 | 3.51e-01 | 96.7% | 33.9% |
| 3756047 | 192.29.1.243 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Fy-3 | 0.66 | 46.0 | 4.10e-01 | 75.0% | 86.7% |
| 5066642 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.66 | 53.0 | 5.08e-01 | 93.3% | 75.7% |
| 4470940 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.64 | 54.0 | 3.39e-01 | 98.3% | 67.1% |
| 3655557 | 148.1.1.25 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Tim17 | 0.64 | 44.0 | 3.54e-01 | 75.0% | 35.2% |
| 3780345 | 101.1.17.32 ↗ | alpha arrays › HTH › HTH › FF domain › LRR_LRWD1 | 0.64 | 48.0 | 3.42e-01 | 83.3% | 40.0% |
| 3923563 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.62 | 43.0 | 3.30e-01 | 73.3% | 40.7% |
| 3611293 | 1189.1.1.6 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › ISG65-75 | 0.62 | 51.0 | 3.28e-01 | 93.3% | 68.7% |
| 3702706 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.61 | 41.0 | 3.73e-01 | 70.0% | 52.5% |
| 4955004 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.60 | 52.0 | 5.29e-01 | 100.0% | 98.3% |
| 4816886 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.60 | 41.0 | 4.11e-01 | 71.7% | 78.3% |
| 3282638 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.59 | 46.0 | 3.63e-01 | 88.3% | 43.0% |
| 3493291 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 44.0 | 3.30e-01 | 85.0% | 47.1% |
| 3886230 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.58 | 42.0 | 3.02e-01 | 80.0% | 83.9% |
| 3452742 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.57 | 48.0 | 3.83e-01 | 100.0% | 82.2% |
| 3320952 | 2006.1.4.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › Tim17 | 0.56 | 44.0 | 3.55e-01 | 93.3% | 67.4% |
| 3389507 | 3817.1.1.1 ↗ | alpha bundles › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Pex19 | 0.55 | 47.0 | 3.81e-01 | 98.3% | 61.7% |
| 3859640 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.53 | 37.0 | 2.70e-01 | 75.0% | 47.4% |
| 3970703 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.53 | 42.0 | 4.03e-01 | 93.3% | 77.3% |
| 3177702 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.52 | 43.0 | 3.02e-01 | 100.0% | 68.5% |
| 4941821 | 853.1.1.0 ↗ | extended segments › Virulence effector SptP domain › Virulence effector SptP domain › Virulence effector SptP domain | 0.52 | 36.0 | 3.21e-01 | 75.0% | 73.7% |