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GU936714.1__ADF42407.1__S-CBS2_gp051__00051

Bact-Vir

GU936714.1__ADF42407.1__S-CBS2_gp051__00051

Identity

Accession:
GU936714 ↗
Kingdom:
phage

Quality

88.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Synechococcus_phage_S-CBS2

TaxID: 753084

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-56
PDB
Domain cluster: rep: PH2015_14_scaffold_1_prodigal-single.1__X__X__00011__D8-54
D2 medium residues 120-171
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d89A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.59 41.0 3.14e-01 75.0% 83.8%
2fclA00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.51 37.0 2.62e-01 78.8% 28.8%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.50 37.0 3.00e-01 84.6% 69.5%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3924174 206.1.1.70 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.53 36.0 2.18e-01 73.1% 11.1%
3555618 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.52 35.0 3.21e-01 71.2% 53.3%
5078481 246.2.1.9 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.51 36.0 2.43e-01 78.8% 79.6%
3499939 387.1.1.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related 0.51 37.0 2.62e-01 80.8% 31.0%