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GU967410.1__ADF83480.1__X__00075

Bact-Vir

GU967410.1__ADF83480.1__X__00075

Identity

Accession:
GU967410 ↗
Kingdom:
phage

Quality

63.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Anamdongvirus› Lactobacillus_phage_LBR48

TaxID: 755164

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-150_242-252
PDB
Domain cluster: rep: IMGVR_UViG_3300028602_000033-3300028602-Ga0265294_1000082513__D295-399_477-497
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10145.15 best PhageMin_Tail 105.7 4.50e-30 99.4% 69.7%
D2 medium residues 151-230
PDB
Domain cluster: rep: OM475429.1__ULG00889.1__X__00027__D382-446_448-460
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10145.15 best PhageMin_Tail 38.0 2.40e-09 76.2% 28.9%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mx8A01 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.67 55.0 4.94e-01 91.3% 95.6%
4fevA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.61 46.0 3.66e-01 82.5% 86.0%
3emzA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 45.0 3.03e-01 80.0% 35.6%
2xheA04 1.25.40.60 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 41.0 3.68e-01 76.2% 49.2%
1hekA00 1.10.150.90 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 0.59 50.0 4.50e-01 98.8% 89.7%
3aayA02 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.59 45.0 3.78e-01 80.0% 80.2%
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.56 42.0 4.05e-01 82.5% 80.9%
1epuA03 1.25.40.60 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 40.0 3.45e-01 75.0% 47.6%
1l8qA03 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.55 43.0 3.99e-01 88.7% 74.8%
2uvaG01 1.20.1050.120 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 44.0 3.82e-01 100.0% 73.5%
3bm3A00 3.40.91.80 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.50 43.0 3.06e-01 96.2% 51.7%
6ks6Z01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.50 42.0 3.03e-01 97.5% 53.2%
6jd6B00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.50 37.0 2.87e-01 80.0% 50.5%
3f4mA00 1.20.1440.160 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like 0.50 39.0 3.19e-01 85.0% 73.4%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030882 159.1.2.6 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail 0.79 73.0 5.27e-01 100.0% 38.6%
3256 612.1.1.6 ↗ alpha arrays › Retroviral matrix proteins › Retroviral matrix proteins › Retroviral matrix proteins › Gag_p15 0.59 50.0 4.50e-01 98.8% 89.7%
5027118 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.58 49.0 3.82e-01 97.5% 93.8%
3368407 601.1.2.78 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › SEO_N 0.58 45.0 3.30e-01 83.7% 68.9%
4197050 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.58 43.0 3.99e-01 81.2% 72.4%
3385990 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.57 44.0 4.06e-01 83.7% 73.3%
4146099 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.57 43.0 4.12e-01 82.5% 84.2%
4266587 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.56 43.0 4.10e-01 83.7% 80.0%
4346134 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.56 43.0 3.98e-01 83.7% 74.0%
4606821 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.56 42.0 3.99e-01 83.7% 81.0%
3731650 176.1.1.0 ↗ alpha arrays › Annexin › Annexin › Annexin 0.55 40.0 3.94e-01 88.7% 71.8%
4606105 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.55 42.0 3.95e-01 83.7% 77.0%
4270831 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.55 42.0 3.90e-01 83.7% 73.3%
4102935 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.55 41.0 3.86e-01 83.7% 73.3%
4067934 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.55 42.0 4.07e-01 85.0% 90.0%
4533441 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.54 43.0 4.12e-01 88.7% 81.1%
4174198 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.54 42.0 3.95e-01 86.3% 76.0%
4051624 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.54 42.0 3.90e-01 86.3% 72.4%
4347676 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.54 41.0 4.02e-01 85.0% 84.4%
4604979 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.52 39.0 3.66e-01 83.7% 77.9%
3594015 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 40.0 3.02e-01 87.5% 79.5%
5081945 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.51 42.0 3.69e-01 100.0% 79.7%
3611942 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 38.0 2.91e-01 86.3% 70.7%
D3 medium residues 253-284_486-512
PDB