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GWB1_scaffold_1_prodigal-single.1__X__X__00409
Bact-VirGWB1_scaffold_1_prodigal-single.1__X__X__00409
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 62-161
Domain cluster:
rep: GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00487__D19-147
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sqpF00 | 1.10.1090.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain F › Cytochrome b-c1 complex subunit 7 | 0.82 | 36.0 | 3.55e-01 | 97.0% | 41.0% |
| 2ob9A00 | 3.30.2220.20 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like | 0.73 | 56.0 | 5.48e-01 | 92.0% | 74.8% |
| 3fghA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.70 | 42.0 | 5.02e-01 | 95.0% | 91.0% |
| 1aabA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.62 | 42.0 | 4.55e-01 | 93.0% | 83.1% |
| 2b8iA00 | 1.20.1280.100 | Mainly Alpha › Up-down Bundle › Monooxygenase › Pas factor, saposin domain | 0.61 | 35.0 | 3.90e-01 | 70.0% | 71.4% |
| 5zr4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 42.0 | 4.21e-01 | 73.0% | 83.3% |
| 3f2eA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 35.0 | 3.82e-01 | 70.0% | 71.1% |
| 5cgaE00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.57 | 44.0 | 3.27e-01 | 85.0% | 32.5% |
| 3fhdA01 | 1.20.120.860 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Herpesvirus alkaline exonuclease, N-terminal domain | 0.55 | 45.0 | 4.11e-01 | 90.0% | 75.0% |
| 2gslF00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.55 | 38.0 | 3.54e-01 | 71.0% | 70.1% |
| 2a2fX02 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.55 | 39.0 | 3.61e-01 | 100.0% | 58.1% |
| 3bg2A02 | 1.10.3550.10 | Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › eoxyguanosinetriphosphate triphosphohydrolase domain-like | 0.54 | 40.0 | 3.92e-01 | 79.0% | 87.5% |
| 7r8bB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 41.0 | 3.03e-01 | 84.0% | 93.9% |
| 3l8nA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.52 | 27.0 | 3.06e-01 | 91.0% | 63.2% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 30.0 | 3.10e-01 | 81.0% | 59.3% |
| 3hyuA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 36.0 | 3.21e-01 | 72.0% | 92.9% |
| 2gkmA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 35.0 | 3.25e-01 | 71.0% | 89.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3771668 | 4133.1.1.0 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like | 0.64 | 36.0 | 3.82e-01 | 96.0% | 62.2% |
| 3738224 | 190.1.1.3 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box_2 | 0.61 | 42.0 | 4.57e-01 | 95.0% | 88.7% |
| 3976621 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.60 | 41.0 | 4.02e-01 | 70.0% | 86.4% |
| 4944817 | 620.1.1.0 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases | 0.57 | 41.0 | 3.51e-01 | 75.0% | 93.0% |
| 3952729 | 620.1.1.5 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › MDMPI_N | 0.54 | 45.0 | 3.82e-01 | 91.0% | 64.2% |
| 3588332 | 5069.1.1.23 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF2798 | 0.53 | 41.0 | 3.74e-01 | 85.0% | 82.1% |
| 4110524 | 4979.2.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD | 0.52 | 38.0 | 3.96e-01 | 78.0% | 95.8% |
| 4017411 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.52 | 44.0 | 3.89e-01 | 95.0% | 88.0% |
| 3941484 | 7012.1.1.1 ↗ | a+b complex topology › Monotopic phosphoglycosyl transferase (PGT)-like › Monotopic phosphoglycosyl transferase (PGT)-like › Monotopic phosphoglycosyl transferase (PGT)-like › Bac_transf | 0.51 | 39.0 | 3.11e-01 | 81.0% | 78.0% |
| 4952765 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.50 | 38.0 | 3.39e-01 | 83.0% | 56.4% |
| None | — | 0.50 | 41.0 | 2.66e-01 | 88.0% | 83.9% |