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GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00003

Bact-Vir

GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00003

Identity

Kingdom:
phage

Quality

82.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-82
PDB
Domain cluster: representative
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 58.0 6.37e-01 91.9% 94.0%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 60.0 6.56e-01 91.9% 98.0%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 58.0 6.01e-01 91.9% 83.1%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 58.0 5.57e-01 95.2% 69.0%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 57.0 6.24e-01 95.2% 96.1%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 56.0 5.30e-01 93.5% 65.8%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.76 56.0 5.99e-01 93.5% 92.3%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.76 55.0 5.71e-01 93.5% 82.5%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 59.0 6.16e-01 93.5% 91.2%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 56.0 5.54e-01 95.2% 76.6%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 59.0 5.43e-01 93.5% 68.8%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 53.0 5.71e-01 91.9% 92.3%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.73 54.0 5.71e-01 93.5% 90.7%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.73 49.0 5.50e-01 85.5% 93.5%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.71 62.0 5.28e-01 93.5% 63.2%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 53.0 5.67e-01 95.2% 92.6%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 51.0 5.68e-01 85.5% 100.0%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 61.0 5.53e-01 96.8% 76.5%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 5.53e-01 91.9% 84.6%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.67 53.0 5.22e-01 93.5% 80.6%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 57.0 5.82e-01 93.5% 98.4%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 58.0 5.37e-01 95.2% 85.9%
2e5kA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 57.0 5.66e-01 93.5% 98.4%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 56.0 5.37e-01 91.9% 82.9%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 57.0 5.85e-01 93.5% 100.0%
2yrvA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 56.0 4.59e-01 93.5% 51.3%
2daqA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 56.0 4.63e-01 93.5% 54.5%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 58.0 4.76e-01 95.2% 58.3%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 57.0 5.25e-01 95.2% 74.7%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 58.0 4.98e-01 100.0% 63.5%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.65 49.0 5.28e-01 90.3% 100.0%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 5.45e-01 95.2% 92.5%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 5.36e-01 95.2% 84.7%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 56.0 5.73e-01 95.2% 100.0%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 53.0 5.19e-01 93.5% 83.8%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 54.0 5.36e-01 93.5% 90.6%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 53.0 5.44e-01 91.9% 98.3%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 54.0 5.41e-01 93.5% 95.2%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 52.0 4.99e-01 93.5% 89.2%
1h3zA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 4.46e-01 93.5% 57.4%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.63 48.0 3.08e-01 87.1% 33.1%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 50.0 5.25e-01 87.1% 100.0%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 52.0 4.92e-01 95.2% 88.0%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 54.0 4.66e-01 98.4% 85.4%
8f5dA05 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.59 43.0 3.02e-01 79.0% 79.6%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 47.0 3.78e-01 91.9% 92.5%
1awoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 48.0 5.01e-01 95.2% 100.0%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 52.0 4.84e-01 98.4% 100.0%
4bubA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.58 42.0 2.92e-01 79.0% 80.0%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.58 44.0 2.79e-01 87.1% 30.8%
3f7wA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 44.0 3.89e-01 83.9% 94.5%
2rsxA00 3.10.450.420 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 40.0 3.19e-01 85.5% 90.6%
1pxfA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 37.0 3.12e-01 71.0% 75.7%
5kvsA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 37.0 2.90e-01 75.8% 38.3%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.53 40.0 3.42e-01 80.6% 53.5%
5bncA02 3.20.180.10 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like 0.52 45.0 4.00e-01 98.4% 81.7%
8axiA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 39.0 2.48e-01 87.1% 27.1%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3302817 4.1.1.362 beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 0.82 60.0 4.93e-01 93.5% 44.0%
3651961 4.1.1.251 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 0.82 60.0 6.38e-01 93.5% 87.3%
3474715 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 60.0 5.94e-01 93.5% 73.8%
3999723 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 61.0 4.48e-01 93.5% 32.7%
3358753 4.1.1.381 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 0.81 61.0 4.36e-01 95.2% 29.7%
4863023 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.81 55.0 6.20e-01 87.1% 91.7%
3229601 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.81 59.0 6.05e-01 93.5% 80.0%
4200330 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.80 59.0 4.62e-01 93.5% 38.4%
3671986 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.80 60.0 5.78e-01 95.2% 70.0%
4024914 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.80 56.0 5.71e-01 88.7% 75.0%
3740753 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.80 57.0 5.68e-01 91.9% 72.3%
4963650 4.1.1.488 beta barrels › SH3 › SH3 › SH3 › DUF7346 0.80 54.0 5.74e-01 93.5% 80.0%
3486328 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 58.0 5.94e-01 93.5% 80.0%
3586487 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 57.0 5.07e-01 91.9% 55.3%
4098445 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.79 58.0 5.89e-01 93.5% 80.0%
3622846 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.79 58.0 6.32e-01 93.5% 96.0%
3660923 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 58.0 5.55e-01 93.5% 68.6%
3721794 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 59.0 5.99e-01 93.5% 81.7%
3907619 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 58.0 5.14e-01 93.5% 56.5%
3228278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 59.0 5.82e-01 95.2% 75.4%
3910433 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 62.0 6.10e-01 95.2% 80.0%
3616243 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 59.0 6.23e-01 95.2% 89.1%
164934 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.78 58.0 5.57e-01 95.2% 69.0%
3620094 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 57.0 5.98e-01 93.5% 87.3%
3562168 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.77 56.0 4.93e-01 93.5% 53.3%
3486327 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 56.0 5.76e-01 93.5% 80.0%
4890270 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.77 55.0 5.85e-01 91.9% 87.0%
4029093 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 57.0 4.18e-01 95.2% 31.6%
4000280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 56.0 5.90e-01 93.5% 87.3%
3881123 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 58.0 5.13e-01 95.2% 58.8%
3617111 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 55.0 4.85e-01 95.2% 53.3%
3795121 4.1.1.110 beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.75 56.0 5.54e-01 95.2% 75.4%
3323530 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.75 65.0 6.43e-01 93.5% 89.2%
5033075 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 53.0 5.57e-01 93.5% 83.6%
4881976 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.74 54.0 5.11e-01 93.5% 64.9%
5040416 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 51.0 5.63e-01 91.9% 90.0%
3398093 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.74 56.0 5.76e-01 95.2% 83.3%
3517728 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.74 56.0 5.40e-01 95.2% 71.4%
3510526 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 56.0 5.88e-01 91.9% 90.9%
3999725 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 57.0 5.09e-01 93.5% 60.0%
4002896 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 56.0 4.91e-01 95.2% 55.6%
5074039 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 63.0 5.87e-01 91.9% 78.7%
4660107 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.73 61.0 6.25e-01 98.4% 93.3%
4357819 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.73 62.0 5.98e-01 100.0% 81.4%
4026957 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 55.0 5.61e-01 95.2% 83.3%
3576438 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 57.0 5.01e-01 96.8% 57.8%
3169607 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.72 60.0 5.66e-01 98.4% 74.7%
3923813 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 62.0 6.09e-01 91.9% 89.2%
3684908 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.72 61.0 5.74e-01 100.0% 76.0%
4629022 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.72 61.0 5.89e-01 98.4% 81.4%
3883159 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 55.0 4.79e-01 95.2% 55.6%
4420173 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.72 57.0 5.31e-01 95.2% 69.3%
4284598 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.72 62.0 5.35e-01 91.9% 65.6%
3396951 4.1.1.330 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.72 63.0 3.76e-01 95.2% 16.0%
5001589 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.71 62.0 5.18e-01 93.5% 60.0%
1140051 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 53.0 5.84e-01 88.7% 100.0%
3240406 4.1.1.347 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.71 62.0 4.99e-01 95.2% 83.5%
5067227 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.59e-01 95.2% 73.5%
4932696 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.70 62.0 5.21e-01 95.2% 61.0%
3275404 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 53.0 5.36e-01 100.0% 83.3%
4167626 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.70 48.0 4.74e-01 71.0% 98.5%
4058174 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 52.0 5.16e-01 93.5% 76.9%
5025079 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 49.0 5.21e-01 93.5% 85.5%
None 0.69 62.0 3.46e-01 100.0% 8.5%
3651964 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.68 62.0 4.95e-01 100.0% 77.5%
3366578 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.68 62.0 4.92e-01 100.0% 77.5%
4121981 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.68 62.0 4.87e-01 100.0% 75.2%
3406803 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 60.0 5.77e-01 96.8% 85.7%
3498357 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 58.0 5.58e-01 93.5% 84.3%
None 0.68 62.0 3.39e-01 100.0% 7.8%
2893010 4.1.1.8 beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.68 50.0 5.30e-01 91.9% 90.7%
3198731 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.67 61.0 4.73e-01 100.0% 73.1%
3853422 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 58.0 4.81e-01 95.2% 59.0%
3498280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 61.0 4.69e-01 100.0% 74.6%
3492982 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.66 61.0 4.64e-01 100.0% 71.9%
3479037 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.18e-01 93.5% 77.5%
3928987 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.14e-01 93.5% 73.8%
3484618 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 56.0 5.28e-01 93.5% 80.0%
3765126 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 54.0 5.67e-01 88.7% 100.0%
3524130 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.65 56.0 4.60e-01 93.5% 54.5%
3879172 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 56.0 5.53e-01 93.5% 93.8%
3482646 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 56.0 3.90e-01 96.8% 64.5%
2725406 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 55.0 5.04e-01 95.2% 72.0%
3469800 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 54.0 4.94e-01 91.9% 73.8%
158943 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 54.0 4.98e-01 93.5% 73.4%
3570230 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 56.0 4.93e-01 100.0% 86.7%
3549045 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.61 43.0 3.61e-01 74.2% 60.0%
3209967 10.13.1.0 beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.55 43.0 3.20e-01 91.9% 90.3%
3706106 10.13.1.1 beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.52 41.0 3.10e-01 95.2% 90.5%
None 0.51 40.0 2.40e-01 95.2% 40.5%