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GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00073
Bact-VirGWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00073
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-82
Domain cluster:
rep: MT521992.1__QLF83352.1__SEA_NICEHOUSE_108__00108__D5-108
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12957.14 best | DUF3846 | 44.9 | 1.60e-11 | 92.6% | 61.2% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5w3xD01 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.66 | 41.0 | 4.47e-01 | 87.7% | 76.9% |
| 2rprA00 | 2.20.25.240 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.59 | 39.0 | 3.88e-01 | 82.7% | 64.4% |
| 4hc5D00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 33.0 | 2.91e-01 | 96.3% | 41.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4024839 | 3307.1.1.0 ↗ | a+b two layers › Domain in small RNA methyltransferase HEN1 › Domain in small RNA methyltransferase HEN1 › Domain in small RNA methyltransferase HEN1 | 0.83 | 78.0 | 6.69e-01 | 100.0% | 75.8% |
| 3250470 | 3307.1.1.0 ↗ | a+b two layers › Domain in small RNA methyltransferase HEN1 › Domain in small RNA methyltransferase HEN1 › Domain in small RNA methyltransferase HEN1 | 0.80 | 74.0 | 7.18e-01 | 100.0% | 91.1% |
| 3611608 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.80 | 76.0 | 5.00e-01 | 100.0% | 29.0% |
| 1117621 | 3307.1.1.1 ↗ | a+b two layers › Domain in small RNA methyltransferase HEN1 › Domain in small RNA methyltransferase HEN1 › Domain in small RNA methyltransferase HEN1 › Hen1_Lam_C | 0.78 | 72.0 | 6.08e-01 | 100.0% | 75.0% |
| 3456257 | 3307.1.1.1 ↗ | a+b two layers › Domain in small RNA methyltransferase HEN1 › Domain in small RNA methyltransferase HEN1 › Domain in small RNA methyltransferase HEN1 › Hen1_Lam_C | 0.75 | 69.0 | 5.93e-01 | 100.0% | 84.8% |
| 3235793 | 708.1.1.31 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › PF29684 | 0.67 | 44.0 | 4.71e-01 | 91.4% | 78.6% |
| 3441121 | 708.1.1.2 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY | 0.61 | 38.0 | 4.08e-01 | 91.4% | 74.3% |
| 3415926 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.54 | 34.0 | 3.63e-01 | 74.1% | 72.9% |