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GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00125
Bact-VirGWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00125
Identity
- Kingdom:
- phage
Quality
52.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 73-132
Domain cluster:
rep: S16_GE16_scaffold_10741_prodigal-single.1__X__X__00219__D10-51
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1khbA03 | 3.90.228.20 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.54 | 43.0 | 2.88e-01 | 91.7% | 65.4% |
| 3lgdA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.52 | 40.0 | 2.36e-01 | 83.3% | 22.0% |
| 2e7zA01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.52 | 38.0 | 3.86e-01 | 81.7% | 89.5% |
| 2wtbA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.51 | 39.0 | 2.60e-01 | 88.3% | 26.3% |
| 1crmA00 | 3.10.200.10 | Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase | 0.50 | 42.0 | 2.87e-01 | 100.0% | 60.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3674411 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.54 | 34.0 | 3.54e-01 | 78.3% | 67.3% |
| 3255991 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.54 | 42.0 | 2.75e-01 | 88.3% | 21.3% |
| 3591046 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.51 | 40.0 | 2.58e-01 | 88.3% | 55.3% |
| 4945890 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.51 | 34.0 | 3.01e-01 | 100.0% | 43.2% |
| 4578190 | 2002.1.1.42 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase,A_deaminase_N | 0.51 | 42.0 | 2.48e-01 | 93.3% | 19.8% |
| 4071636 | 2486.1.1.1 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 | 0.51 | 40.0 | 2.60e-01 | 88.3% | 39.3% |
| 3038881 | 6019.1.1.1 ↗ | a+b two layers › C-terminal domain of bypass of forespore C, BofC › C-terminal domain of bypass of forespore C, BofC › C-terminal domain of bypass of forespore C, BofC › BofC_C | 0.51 | 39.0 | 3.62e-01 | 86.7% | 97.5% |