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GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00168

Bact-Vir

GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00168

Identity

Kingdom:
phage

Quality

75.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-71
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wxqA02 1.10.8.470 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.67 42.0 3.90e-01 70.4% 51.1%
1v8oH00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.62 44.0 3.56e-01 74.6% 79.4%
4eq5A01 1.10.3260.10 Mainly Alpha › Orthogonal Bundle › DNA ligase i, domain 1 › DNA ligase, ATP-dependent, N-terminal domain 0.59 40.0 3.02e-01 71.8% 79.1%
1a80A00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.55 40.0 2.75e-01 77.5% 81.2%
6adqG01 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.52 43.0 3.28e-01 93.0% 66.3%
1mi3A00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.52 38.0 2.56e-01 78.9% 82.8%
3vz3A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.50 34.0 2.28e-01 70.4% 91.6%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3832681 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.67 56.0 5.16e-01 95.8% 98.9%
3383233 103.1.1.27 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_7 0.53 47.0 3.78e-01 98.6% 71.4%