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GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00208
Bact-VirGWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00208
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-79
Domain cluster:
representative
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.73 | 54.0 | 4.42e-01 | 76.9% | 62.6% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.72 | 52.0 | 4.16e-01 | 76.9% | 55.6% |
| 7szeB02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.71 | 50.0 | 3.76e-01 | 73.1% | 40.2% |
| 3kg8A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.70 | 54.0 | 4.48e-01 | 80.8% | 94.6% |
| 2zf3C00 | 2.50.20.30 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.70 | 47.0 | 3.60e-01 | 70.5% | 41.8% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.70 | 50.0 | 4.66e-01 | 75.6% | 83.7% |
| 3zxjA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.69 | 53.0 | 3.50e-01 | 82.1% | 48.7% |
| 1ry9A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.67 | 59.0 | 4.99e-01 | 100.0% | 89.5% |
| 7zgmA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.67 | 48.0 | 3.35e-01 | 75.6% | 79.9% |
| 5e1qB01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.66 | 54.0 | 3.61e-01 | 87.2% | 96.0% |
| 2iecD00 | 3.30.1300.20 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) | 0.66 | 45.0 | 3.98e-01 | 71.8% | 66.7% |
| 4htgA03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.66 | 53.0 | 5.33e-01 | 89.7% | 100.0% |
| 2wcoA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.65 | 48.0 | 4.18e-01 | 76.9% | 94.8% |
| 2rqlA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.65 | 55.0 | 5.15e-01 | 93.6% | 89.5% |
| 1jyoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.65 | 57.0 | 4.85e-01 | 100.0% | 83.8% |
| 3ijtB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.64 | 47.0 | 3.81e-01 | 76.9% | 59.4% |
| 1ah5A03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.63 | 51.0 | 4.98e-01 | 89.7% | 89.5% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 43.0 | 3.70e-01 | 70.5% | 51.2% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.63 | 49.0 | 3.94e-01 | 84.6% | 74.7% |
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.62 | 55.0 | 4.70e-01 | 100.0% | 87.5% |
| 1rwhA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.62 | 45.0 | 3.95e-01 | 75.6% | 94.7% |
| 6t5kC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.62 | 52.0 | 3.75e-01 | 92.3% | 95.5% |
| 2ra6C00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.62 | 44.0 | 3.64e-01 | 75.6% | 50.3% |
| 1vavA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 55.0 | 3.97e-01 | 100.0% | 54.5% |
| 3uaqB02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.62 | 51.0 | 4.10e-01 | 93.6% | 94.5% |
| 3pquA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.61 | 51.0 | 3.99e-01 | 93.6% | 85.3% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.61 | 54.0 | 4.17e-01 | 97.4% | 62.0% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.61 | 48.0 | 4.20e-01 | 97.4% | 55.9% |
| 3n91A02 | 2.40.128.420 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 51.0 | 4.29e-01 | 93.6% | 90.4% |
| 1nnjA01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.61 | 51.0 | 4.29e-01 | 92.3% | 94.7% |
| 4akmB00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.61 | 53.0 | 4.27e-01 | 98.7% | 81.5% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 52.0 | 5.31e-01 | 98.7% | 98.6% |
| 7bvaA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.61 | 52.0 | 3.82e-01 | 98.7% | 55.8% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.60 | 48.0 | 4.47e-01 | 89.7% | 90.2% |
| 2ebmA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.59 | 48.0 | 4.16e-01 | 91.0% | 78.9% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.59 | 50.0 | 4.36e-01 | 94.9% | 88.5% |
| 2ffsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 45.0 | 3.69e-01 | 82.1% | 73.8% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.58 | 43.0 | 4.51e-01 | 78.2% | 94.4% |
| 4gq1A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 49.0 | 3.20e-01 | 96.2% | 68.3% |
| 3tu3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.57 | 50.0 | 4.38e-01 | 100.0% | 91.6% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.55 | 43.0 | 3.52e-01 | 84.6% | 71.9% |
| 3dasA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 45.0 | 3.05e-01 | 93.6% | 44.6% |
| 4pzaB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.54 | 40.0 | 3.01e-01 | 80.8% | 79.7% |
| 5iqaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 44.0 | 4.26e-01 | 92.3% | 98.9% |
| 4rnyA03 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.53 | 48.0 | 4.01e-01 | 97.4% | 64.8% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.52 | 45.0 | 3.76e-01 | 96.2% | 79.3% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.52 | 43.0 | 3.79e-01 | 92.3% | 63.3% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.52 | 40.0 | 3.74e-01 | 89.7% | 86.2% |
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.52 | 42.0 | 3.81e-01 | 94.9% | 71.3% |
| 6phxA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 42.0 | 3.99e-01 | 93.6% | 93.7% |
| 1bagA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 38.0 | 3.89e-01 | 97.4% | 82.1% |
| 5e1qA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 44.0 | 4.12e-01 | 97.4% | 83.3% |
| 4pn0C00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.50 | 43.0 | 3.02e-01 | 96.2% | 63.3% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3707830 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.77 | 56.0 | 3.66e-01 | 75.6% | 81.0% |
| 4964031 | 7089.1.1.7 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF7543 | 0.75 | 61.0 | 6.36e-01 | 91.0% | 98.6% |
| 3240324 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.70 | 55.0 | 4.19e-01 | 85.9% | 37.7% |
| 3288437 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.70 | 48.0 | 3.87e-01 | 71.8% | 45.3% |
| 4635523 | 331.3.1.20 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C | 0.70 | 50.0 | 3.44e-01 | 74.4% | 30.6% |
| 3424129 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 52.0 | 3.22e-01 | 80.8% | 33.6% |
| 3251788 | 9.1.1.37 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF6314 | 0.69 | 49.0 | 3.86e-01 | 75.6% | 40.6% |
| 3297925 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.68 | 46.0 | 5.18e-01 | 70.5% | 96.7% |
| 3282063 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.68 | 46.0 | 3.95e-01 | 70.5% | 57.6% |
| 1866896 | 274.1.1.12 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSJ | 0.68 | 51.0 | 4.02e-01 | 79.5% | 66.7% |
| 3975309 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.68 | 56.0 | 5.03e-01 | 91.0% | 91.8% |
| 3241869 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.68 | 61.0 | 5.44e-01 | 100.0% | 75.5% |
| 2639646 | 331.3.1.19 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C | 0.68 | 48.0 | 3.54e-01 | 73.1% | 65.5% |
| 3492352 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.68 | 61.0 | 5.50e-01 | 100.0% | 87.6% |
| None | — | 0.67 | 60.0 | 4.96e-01 | 98.7% | 65.7% | |
| 3600669 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.67 | 55.0 | 4.84e-01 | 92.3% | 75.0% |
| 4120507 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.67 | 54.0 | 5.08e-01 | 91.0% | 71.6% |
| 4438684 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.67 | 53.0 | 5.24e-01 | 87.2% | 91.7% |
| 3958686 | 331.3.1.20 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C | 0.67 | 47.0 | 3.44e-01 | 74.4% | 61.4% |
| 3430287 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.67 | 52.0 | 3.46e-01 | 83.3% | 89.2% |
| 4036906 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.66 | 52.0 | 5.23e-01 | 85.9% | 95.0% |
| 3784810 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.66 | 59.0 | 5.53e-01 | 98.7% | 97.9% |
| 3584527 | 216.1.1.9 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d2 | 0.66 | 59.0 | 5.23e-01 | 100.0% | 68.7% |
| 4132764 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.66 | 52.0 | 5.13e-01 | 87.2% | 92.9% |
| 3226500 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.66 | 53.0 | 3.64e-01 | 85.9% | 25.3% |
| 4941968 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.66 | 48.0 | 3.84e-01 | 75.6% | 68.0% |
| 4157358 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.66 | 54.0 | 5.43e-01 | 89.7% | 93.6% |
| 3265841 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.66 | 57.0 | 5.32e-01 | 98.7% | 99.0% |
| 5044599 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.66 | 58.0 | 3.39e-01 | 100.0% | 33.2% |
| 3458523 | 5.1.8.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 | 0.66 | 47.0 | 4.09e-01 | 74.4% | 82.6% |
| 4965501 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.65 | 51.0 | 4.92e-01 | 85.9% | 86.7% |
| 4638542 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.65 | 52.0 | 4.88e-01 | 87.2% | 83.2% |
| 4973433 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.65 | 51.0 | 4.93e-01 | 87.2% | 87.8% |
| 3219318 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.65 | 51.0 | 3.43e-01 | 85.9% | 23.0% |
| 6628 | 241.1.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT | 0.65 | 57.0 | 4.85e-01 | 100.0% | 83.8% |
| 4558929 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.65 | 52.0 | 5.20e-01 | 89.7% | 95.0% |
| 5035253 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.64 | 55.0 | 3.79e-01 | 94.9% | 95.6% |
| 4363805 | 292.2.1.9 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_4 | 0.64 | 51.0 | 4.95e-01 | 98.7% | 76.7% |
| 3986253 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.64 | 55.0 | 4.88e-01 | 100.0% | 94.2% |
| 3843785 | 292.2.1.10 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › C5orf34-like_N | 0.64 | 49.0 | 4.58e-01 | 85.9% | 66.3% |
| 3722190 | 5.1.3.25 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid | 0.64 | 57.0 | 3.83e-01 | 100.0% | 28.7% |
| 4019645 | 109.2.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_92, Glyco_hydro_92N | 0.63 | 56.0 | 3.29e-01 | 100.0% | 37.9% |
| 3468658 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.63 | 52.0 | 3.46e-01 | 88.5% | 49.7% |
| 3399255 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.63 | 55.0 | 4.91e-01 | 100.0% | 89.6% |
| 4262169 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.63 | 50.0 | 4.82e-01 | 89.7% | 90.3% |
| 5794 | 295.1.1.7 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › MRP | 0.63 | 49.0 | 3.94e-01 | 84.6% | 74.7% |
| 3402152 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.63 | 54.0 | 4.76e-01 | 98.7% | 91.7% |
| 3430171 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 54.0 | 3.40e-01 | 100.0% | 21.1% |
| 3614586 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.62 | 53.0 | 4.69e-01 | 96.2% | 94.9% |
| 3715712 | 2485.2.1.1 ↗ | a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert | 0.62 | 48.0 | 4.43e-01 | 85.9% | 81.9% |
| 3331262 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.62 | 53.0 | 5.03e-01 | 98.7% | 97.9% |
| 4209630 | 331.3.1.20 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C | 0.62 | 55.0 | 3.94e-01 | 96.2% | 64.3% |
| 4161565 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.61 | 49.0 | 4.67e-01 | 89.7% | 88.4% |
| 3415735 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.61 | 53.0 | 5.00e-01 | 100.0% | 97.9% |
| 4058654 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.61 | 49.0 | 4.57e-01 | 89.7% | 78.8% |
| None | — | 0.61 | 51.0 | 5.02e-01 | 96.2% | 98.8% | |
| 3791593 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 46.0 | 3.71e-01 | 80.8% | 72.7% |
| 3167601 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.60 | 51.0 | 4.86e-01 | 98.7% | 98.9% |
| 3409717 | 633.33.1.1 ↗ | alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz | 0.60 | 43.0 | 3.09e-01 | 76.9% | 57.2% |
| 2905297 | 10.1.1.41 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH43_C2 | 0.60 | 51.0 | 3.90e-01 | 98.7% | 78.7% |
| 3579622 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.60 | 48.0 | 4.20e-01 | 85.9% | 60.0% |
| 3407222 | 633.23.1.17 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › DuoxA | 0.59 | 44.0 | 3.08e-01 | 79.5% | 33.2% |
| 4259150 | 295.1.1.46 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › WapI | 0.59 | 48.0 | 4.04e-01 | 89.7% | 57.8% |
| 3404947 | 5.1.4.341 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd | 0.59 | 49.0 | 3.29e-01 | 93.6% | 75.2% |
| None | — | 0.59 | 49.0 | 4.34e-01 | 96.2% | 73.3% | |
| 4024970 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.58 | 52.0 | 3.25e-01 | 98.7% | 94.7% |
| 4935472 | 330.4.1.0 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain | 0.58 | 47.0 | 4.88e-01 | 98.7% | 100.0% |
| 3482455 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.57 | 50.0 | 3.68e-01 | 98.7% | 53.3% |
| 3831470 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.56 | 46.0 | 3.23e-01 | 94.9% | 83.6% |
| 3806989 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.56 | 46.0 | 3.23e-01 | 96.2% | 89.8% |
| 3957060 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.55 | 48.0 | 3.87e-01 | 94.9% | 60.0% |
| 3953302 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.55 | 46.0 | 4.17e-01 | 91.0% | 73.1% |
| 4964630 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.53 | 45.0 | 3.81e-01 | 100.0% | 64.3% |
| 3599391 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.52 | 45.0 | 3.26e-01 | 94.9% | 65.8% |
| 9393 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.50 | 38.0 | 2.71e-01 | 82.1% | 90.2% |
D2
high
residues 86-169
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3r4iA02 | 6.10.140.960 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 30.0 | 3.53e-01 | 86.9% | 80.0% |
| 4xhpA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 40.0 | 3.24e-01 | 85.7% | 92.3% |
| 4l80D00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.51 | 37.0 | 2.49e-01 | 76.2% | 91.3% |
| 3cdhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.63e-01 | 91.7% | 63.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3171568 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.61 | 46.0 | 3.38e-01 | 81.0% | 64.3% |
| 4026711 | 109.4.1.21 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ENTH | 0.53 | 41.0 | 3.48e-01 | 84.5% | 80.0% |
| 4600241 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.52 | 36.0 | 2.76e-01 | 100.0% | 31.6% |
| 4947926 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.51 | 39.0 | 2.92e-01 | 94.0% | 31.1% |
D3
high
residues 193-275
Domain cluster:
representative
CATH (75)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.69 | 56.0 | 5.63e-01 | 98.8% | 84.7% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.69 | 54.0 | 4.93e-01 | 98.8% | 64.5% |
| 3ofnY00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.69 | 61.0 | 5.46e-01 | 98.8% | 75.7% |
| 4mycA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.67 | 54.0 | 3.63e-01 | 88.0% | 42.1% |
| 1jadA00 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.67 | 57.0 | 4.06e-01 | 92.8% | 78.5% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.66 | 43.0 | 4.35e-01 | 97.6% | 65.9% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.65 | 45.0 | 3.88e-01 | 71.1% | 51.6% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.65 | 53.0 | 5.08e-01 | 100.0% | 75.8% |
| 2l81A00 | 1.20.120.830 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine-rich domain | 0.64 | 56.0 | 4.46e-01 | 98.8% | 95.5% |
| 7p3rA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.64 | 58.0 | 3.84e-01 | 100.0% | 57.8% |
| 3vbbE01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.64 | 57.0 | 5.08e-01 | 100.0% | 77.3% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 50.0 | 4.84e-01 | 94.0% | 75.0% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.64 | 49.0 | 5.38e-01 | 83.1% | 100.0% |
| 4p9tA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.63 | 46.0 | 4.11e-01 | 77.1% | 97.5% |
| 3g80A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.63 | 49.0 | 5.19e-01 | 100.0% | 97.3% |
| 2vs0A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.63 | 54.0 | 5.50e-01 | 95.2% | 97.6% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 51.0 | 5.00e-01 | 97.6% | 82.2% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 46.0 | 4.39e-01 | 100.0% | 67.7% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.62 | 50.0 | 4.04e-01 | 97.6% | 44.8% |
| 3qweA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.62 | 55.0 | 3.87e-01 | 98.8% | 34.6% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.62 | 44.0 | 4.87e-01 | 95.2% | 96.9% |
| 1zvzA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.61 | 49.0 | 4.23e-01 | 86.7% | 56.5% |
| 3ck6C02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.61 | 54.0 | 4.78e-01 | 96.4% | 68.9% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.61 | 55.0 | 4.39e-01 | 100.0% | 86.3% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.61 | 53.0 | 3.72e-01 | 98.8% | 30.9% |
| 6v9zA02 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.60 | 47.0 | 3.20e-01 | 85.5% | 40.3% |
| 2rd0B00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 53.0 | 4.50e-01 | 98.8% | 61.2% |
| 1i4dA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.60 | 54.0 | 4.13e-01 | 100.0% | 45.2% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 52.0 | 4.82e-01 | 98.8% | 94.3% |
| 2pihA00 | 1.20.1500.10 | Mainly Alpha › Up-down Bundle › YheA-like fold › YheA/YmcA-like | 0.60 | 46.0 | 3.97e-01 | 80.7% | 86.2% |
| 2g38B00 | 1.20.1260.20 | Mainly Alpha › Up-down Bundle › Ferritin › PPE superfamily | 0.59 | 52.0 | 4.12e-01 | 98.8% | 47.4% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.59 | 49.0 | 4.70e-01 | 95.2% | 77.6% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.59 | 47.0 | 4.98e-01 | 89.2% | 98.6% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.59 | 53.0 | 3.73e-01 | 100.0% | 41.6% |
| 2ke4A00 | 6.10.140.470 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 53.0 | 5.01e-01 | 98.8% | 88.8% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 44.0 | 4.77e-01 | 98.8% | 100.0% |
| 6q45G01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.59 | 53.0 | 4.38e-01 | 100.0% | 90.4% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 50.0 | 5.14e-01 | 97.6% | 96.3% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.59 | 49.0 | 4.17e-01 | 97.6% | 56.3% |
| 4bg5B00 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.58 | 52.0 | 3.97e-01 | 100.0% | 41.7% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.58 | 52.0 | 4.02e-01 | 98.8% | 74.3% |
| 2okuA00 | 1.20.120.470 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Acyl-CoA dehydrogenase, C-terminal domain | 0.58 | 40.0 | 3.57e-01 | 98.8% | 48.4% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.58 | 49.0 | 5.02e-01 | 92.8% | 97.5% |
| 1gqeA01 | 1.20.58.410 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor | 0.58 | 43.0 | 3.89e-01 | 84.3% | 57.5% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.58 | 51.0 | 4.41e-01 | 100.0% | 61.7% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.58 | 40.0 | 3.93e-01 | 77.1% | 66.7% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.58 | 50.0 | 5.01e-01 | 98.8% | 97.7% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 52.0 | 5.11e-01 | 98.8% | 94.3% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 43.0 | 4.43e-01 | 90.4% | 81.5% |
| 4q4hA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.58 | 52.0 | 3.49e-01 | 100.0% | 37.4% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.58 | 50.0 | 4.67e-01 | 98.8% | 75.7% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 51.0 | 3.74e-01 | 100.0% | 56.1% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.56 | 51.0 | 4.46e-01 | 100.0% | 67.7% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.56 | 49.0 | 4.44e-01 | 100.0% | 72.3% |
| 4it4A02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 41.0 | 4.00e-01 | 90.4% | 70.3% |
| 3vkgA12 | 1.10.287.2610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 49.0 | 3.65e-01 | 98.8% | 53.0% |
| 3r6nB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 49.0 | 3.62e-01 | 98.8% | 37.5% |
| 2gl2B00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 47.0 | 4.39e-01 | 97.6% | 85.3% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.55 | 43.0 | 4.15e-01 | 92.8% | 74.2% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.55 | 47.0 | 4.53e-01 | 98.8% | 88.0% |
| 1zvuA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.55 | 46.0 | 3.94e-01 | 95.2% | 82.9% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.55 | 44.0 | 3.87e-01 | 85.5% | 60.0% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 49.0 | 4.71e-01 | 100.0% | 100.0% |
| 2oezA02 | 1.10.3900.10 | Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like | 0.55 | 47.0 | 3.87e-01 | 100.0% | 52.1% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 47.0 | 3.93e-01 | 96.4% | 83.0% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 48.0 | 4.13e-01 | 97.6% | 68.0% |
| 4dylA02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.54 | 46.0 | 4.50e-01 | 98.8% | 86.2% |
| 2wyhB04 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.54 | 40.0 | 3.78e-01 | 81.9% | 65.3% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.54 | 39.0 | 4.23e-01 | 79.5% | 95.6% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 47.0 | 4.59e-01 | 100.0% | 96.8% |
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.53 | 40.0 | 3.64e-01 | 78.3% | 60.7% |
| 3pe0A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 42.0 | 3.94e-01 | 84.3% | 69.3% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 45.0 | 4.29e-01 | 100.0% | 88.3% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.52 | 44.0 | 4.37e-01 | 94.0% | 91.8% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 43.0 | 4.07e-01 | 98.8% | 76.5% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3491651 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.68 | 53.0 | 4.03e-01 | 89.2% | 37.3% |
| 4515899 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 58.0 | 4.59e-01 | 98.8% | 60.6% |
| 3294636 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 57.0 | 5.20e-01 | 100.0% | 80.0% |
| 3552608 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.64 | 48.0 | 3.94e-01 | 86.7% | 44.0% |
| 4136919 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.63 | 57.0 | 4.37e-01 | 98.8% | 52.4% |
| 3283457 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.63 | 56.0 | 5.29e-01 | 98.8% | 85.0% |
| 3719904 | 148.1.3.13 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 | 0.63 | 56.0 | 3.60e-01 | 98.8% | 21.9% |
| 3231243 | 4177.1.1.10 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH | 0.62 | 55.0 | 3.80e-01 | 98.8% | 29.3% |
| 4414254 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.62 | 55.0 | 3.83e-01 | 100.0% | 84.3% |
| 3676480 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.62 | 53.0 | 5.18e-01 | 97.6% | 86.7% |
| 5026085 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.61 | 52.0 | 4.86e-01 | 96.4% | 86.1% |
| 3962893 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.61 | 55.0 | 5.26e-01 | 98.8% | 86.3% |
| 3282761 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.61 | 54.0 | 5.20e-01 | 98.8% | 94.7% |
| 3287601 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.61 | 54.0 | 5.22e-01 | 98.8% | 89.4% |
| 3616669 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 52.0 | 4.70e-01 | 98.8% | 68.7% |
| 4209793 | 1203.1.2.0 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 | 0.61 | 54.0 | 4.16e-01 | 100.0% | 44.7% |
| 3861615 | 150.1.1.190 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › SAP130_C | 0.60 | 52.0 | 4.91e-01 | 98.8% | 79.0% |
| 3279432 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.60 | 49.0 | 4.45e-01 | 86.7% | 73.6% |
| 3178828 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.60 | 47.0 | 3.18e-01 | 85.5% | 44.3% |
| 3699463 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 53.0 | 3.94e-01 | 98.8% | 40.5% |
| 3390311 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.60 | 53.0 | 4.85e-01 | 100.0% | 80.9% |
| 4333962 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.59 | 53.0 | 3.92e-01 | 100.0% | 38.6% |
| 3855880 | 622.4.1.19 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › CD20 | 0.59 | 51.0 | 4.66e-01 | 92.8% | 72.4% |
| 4045132 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.59 | 52.0 | 4.78e-01 | 98.8% | 80.0% |
| 2674763 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.59 | 47.0 | 4.94e-01 | 86.7% | 96.0% |
| 3406218 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.59 | 52.0 | 4.80e-01 | 100.0% | 83.6% |
| 3766955 | 192.7.1.17 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FAM186A-B_C | 0.59 | 51.0 | 4.22e-01 | 100.0% | 54.5% |
| 3702706 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.59 | 49.0 | 5.02e-01 | 90.4% | 98.8% |
| 5049284 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.59 | 52.0 | 4.64e-01 | 100.0% | 72.5% |
| 4305317 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.59 | 51.0 | 3.01e-01 | 98.8% | 22.2% |
| 3375240 | 3755.3.1.575 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › BPS1 | 0.59 | 47.0 | 3.64e-01 | 98.8% | 39.1% |
| 3949790 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.59 | 52.0 | 4.89e-01 | 98.8% | 82.0% |
| 3961148 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.58 | 52.0 | 4.61e-01 | 100.0% | 73.3% |
| 2321604 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.58 | 52.0 | 3.51e-01 | 100.0% | 37.5% |
| 3976215 | 105.2.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C | 0.58 | 51.0 | 4.23e-01 | 100.0% | 55.5% |
| 3635376 | 3755.3.1.298 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › ING | 0.58 | 51.0 | 4.41e-01 | 100.0% | 93.3% |
| 4214119 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.58 | 52.0 | 3.61e-01 | 100.0% | 30.2% |
| 5065235 | 101.1.2.738 ↗ | alpha arrays › HTH › HTH › winged helix domain › Vir_act_alpha_C | 0.58 | 52.0 | 3.99e-01 | 98.8% | 44.3% |
| 4549103 | 3755.4.1.54 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PF30340 | 0.58 | 51.0 | 3.32e-01 | 100.0% | 67.4% |
| 4572974 | 3922.1.1.79 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › SAP130_C | 0.58 | 52.0 | 4.66e-01 | 98.8% | 74.8% |
| 4408647 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.58 | 52.0 | 4.80e-01 | 98.8% | 84.8% |
| 3711734 | 3755.3.1.297 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF9 | 0.58 | 51.0 | 4.08e-01 | 98.8% | 67.3% |
| 5041060 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.58 | 48.0 | 5.04e-01 | 94.0% | 100.0% |
| 5027389 | 603.1.1.241 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › CdvA | 0.58 | 49.0 | 4.47e-01 | 98.8% | 69.6% |
| 4193568 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.58 | 48.0 | 4.89e-01 | 89.2% | 95.0% |
| 3935140 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.57 | 50.0 | 3.97e-01 | 100.0% | 49.4% |
| 4273807 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.57 | 51.0 | 3.19e-01 | 98.8% | 18.6% |
| 4969095 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 51.0 | 3.22e-01 | 98.8% | 19.8% |
| 3532355 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.57 | 50.0 | 3.42e-01 | 97.6% | 69.5% |
| 4015065 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.57 | 46.0 | 3.11e-01 | 90.4% | 40.3% |
| 3181110 | 5086.1.1.110 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HisKA | 0.57 | 51.0 | 4.87e-01 | 100.0% | 90.5% |
| 3453972 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.57 | 50.0 | 4.25e-01 | 100.0% | 67.9% |
| 3886230 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.57 | 50.0 | 3.81e-01 | 100.0% | 61.8% |
| 3519972 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.56 | 49.0 | 4.80e-01 | 96.4% | 92.2% |
| 3950765 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.56 | 49.0 | 3.28e-01 | 98.8% | 24.1% |
| 3224742 | 3755.3.1.9 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › SH3BP5 | 0.56 | 50.0 | 3.70e-01 | 98.8% | 99.1% |
| 3255108 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.56 | 48.0 | 3.35e-01 | 98.8% | 29.0% |
| 3904356 | 3755.3.1.9 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › SH3BP5 | 0.56 | 49.0 | 3.73e-01 | 100.0% | 53.7% |
| 4596325 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.56 | 48.0 | 4.07e-01 | 100.0% | 62.7% |
| 4315070 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.56 | 49.0 | 3.89e-01 | 100.0% | 49.1% |
| 3275446 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.55 | 48.0 | 4.18e-01 | 98.8% | 62.3% |
| 3611163 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.55 | 49.0 | 3.13e-01 | 100.0% | 29.9% |
| 4321934 | 101.1.2.311 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA12 | 0.55 | 48.0 | 3.87e-01 | 98.8% | 50.0% |
| 4210642 | 3755.1.1.12 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › CheZ | 0.55 | 45.0 | 3.97e-01 | 100.0% | 59.2% |
| 3599499 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.54 | 49.0 | 3.99e-01 | 98.8% | 94.7% |
| 3972236 | 3755.3.1.42 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CheZ | 0.53 | 46.0 | 3.66e-01 | 98.8% | 46.1% |
| 3473220 | 5086.1.1.209 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › LIN9_C | 0.53 | 46.0 | 4.15e-01 | 97.6% | 78.3% |
| 3586871 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.53 | 47.0 | 3.55e-01 | 100.0% | 48.8% |
| 3478220 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.53 | 46.0 | 4.42e-01 | 100.0% | 83.0% |
| 3754639 | 150.5.1.106 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › LIN9_C | 0.53 | 46.0 | 4.60e-01 | 98.8% | 97.6% |
| 3255143 | 630.1.1.0 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain | 0.53 | 45.0 | 3.55e-01 | 97.6% | 55.1% |
| 4203309 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 46.0 | 2.91e-01 | 96.4% | 52.0% |
| 3832 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.53 | 45.0 | 4.29e-01 | 100.0% | 88.3% |
| 3704099 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.51 | 44.0 | 2.87e-01 | 100.0% | 26.7% |
| 3403179 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.50 | 43.0 | 4.07e-01 | 100.0% | 84.8% |