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GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00234
Bact-VirGWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00234
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-116
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_269347_prodigal-single.1__X__X__00289__D25-121
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x5gA00 | 3.30.720.60 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.69 | 44.0 | 4.86e-01 | 86.5% | 79.1% |
| 3hkmB00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.57 | 44.0 | 3.61e-01 | 83.8% | 98.1% |
| 1uuzB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.54 | 43.0 | 4.12e-01 | 84.7% | 76.6% |
| 1xa6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 32.0 | 3.34e-01 | 72.1% | 63.5% |
| 3gkeA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.53 | 44.0 | 3.65e-01 | 93.7% | 66.7% |
| 4dzoA02 | 3.30.457.60 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.52 | 30.0 | 3.36e-01 | 93.7% | 76.6% |
| 2e50B02 | 3.30.1120.90 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Nucleosome assembly protein | 0.52 | 42.0 | 4.21e-01 | 88.3% | 98.2% |
| 3gywA02 | 3.30.1120.90 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Nucleosome assembly protein | 0.51 | 43.0 | 4.15e-01 | 93.7% | 97.6% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 34.0 | 3.19e-01 | 95.5% | 53.8% |
| 1f5aA03 | 1.10.1410.10 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.50 | 44.0 | 3.78e-01 | 100.0% | 99.5% |
| 4o01D01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 40.0 | 3.30e-01 | 86.5% | 67.1% |