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GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00276

Bact-Vir

GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00276

Identity

Kingdom:
phage

Quality

80.5 mean pLDDT

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-58
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3513853 170.2.1.27 ↗ alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain › DUF7041 0.55 39.0 3.59e-01 80.0% 77.0%
D2 high residues 64-144
PDB
Domain cluster: rep: GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00588__D14-92
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF08281.19 best Sigma70_r4_2 28.7 1.10e-06 66.7% 96.3%
PF04545.23 Sigma70_r4 24.9 1.60e-05 60.5% 96.0%
D3 high residues 150-228
PDB
Domain cluster: rep: GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00588__D98-170